Sample_002007_ItsyBitsy

Directories and files

Directories (mostly accessions/samples)

QC -- Quality Control from the FastQC program

Files .. if large you may wish to save them first

Size Name
352M 002007_ItsyBitsy_ATTCCT_L002_R1_001.fastq.gz
353M 002007_ItsyBitsy_ATTCCT_L002_R1_002.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L002_R1_003.fastq.gz
350M 002007_ItsyBitsy_ATTCCT_L002_R1_004.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L002_R1_005.fastq.gz
354M 002007_ItsyBitsy_ATTCCT_L002_R1_006.fastq.gz
357M 002007_ItsyBitsy_ATTCCT_L002_R1_007.fastq.gz
376M 002007_ItsyBitsy_ATTCCT_L002_R1_008.fastq.gz
374M 002007_ItsyBitsy_ATTCCT_L002_R1_009.fastq.gz
352M 002007_ItsyBitsy_ATTCCT_L002_R1_010.fastq.gz
232M 002007_ItsyBitsy_ATTCCT_L002_R1_011.fastq.gz
2K 002007_ItsyBitsy_ATTCCT_L002_R1_MANY.fastq.gz.stats
349M 002007_ItsyBitsy_ATTCCT_L002_R2_001.fastq.gz
350M 002007_ItsyBitsy_ATTCCT_L002_R2_002.fastq.gz
344M 002007_ItsyBitsy_ATTCCT_L002_R2_003.fastq.gz
346M 002007_ItsyBitsy_ATTCCT_L002_R2_004.fastq.gz
346M 002007_ItsyBitsy_ATTCCT_L002_R2_005.fastq.gz
351M 002007_ItsyBitsy_ATTCCT_L002_R2_006.fastq.gz
353M 002007_ItsyBitsy_ATTCCT_L002_R2_007.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L002_R2_008.fastq.gz
351M 002007_ItsyBitsy_ATTCCT_L002_R2_009.fastq.gz
348M 002007_ItsyBitsy_ATTCCT_L002_R2_010.fastq.gz
231M 002007_ItsyBitsy_ATTCCT_L002_R2_011.fastq.gz
2K 002007_ItsyBitsy_ATTCCT_L002_R2_MANY.fastq.gz.stats
350M 002007_ItsyBitsy_ATTCCT_L003_R1_001.fastq.gz
352M 002007_ItsyBitsy_ATTCCT_L003_R1_002.fastq.gz
354M 002007_ItsyBitsy_ATTCCT_L003_R1_003.fastq.gz
354M 002007_ItsyBitsy_ATTCCT_L003_R1_004.fastq.gz
351M 002007_ItsyBitsy_ATTCCT_L003_R1_005.fastq.gz
351M 002007_ItsyBitsy_ATTCCT_L003_R1_006.fastq.gz
350M 002007_ItsyBitsy_ATTCCT_L003_R1_007.fastq.gz
370M 002007_ItsyBitsy_ATTCCT_L003_R1_008.fastq.gz
374M 002007_ItsyBitsy_ATTCCT_L003_R1_009.fastq.gz
361M 002007_ItsyBitsy_ATTCCT_L003_R1_010.fastq.gz
356M 002007_ItsyBitsy_ATTCCT_L003_R1_011.fastq.gz
2K 002007_ItsyBitsy_ATTCCT_L003_R1_MANY.fastq.gz.stats
346M 002007_ItsyBitsy_ATTCCT_L003_R2_001.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L003_R2_002.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L003_R2_003.fastq.gz
349M 002007_ItsyBitsy_ATTCCT_L003_R2_004.fastq.gz
347M 002007_ItsyBitsy_ATTCCT_L003_R2_005.fastq.gz
350M 002007_ItsyBitsy_ATTCCT_L003_R2_006.fastq.gz
348M 002007_ItsyBitsy_ATTCCT_L003_R2_007.fastq.gz
353M 002007_ItsyBitsy_ATTCCT_L003_R2_008.fastq.gz
354M 002007_ItsyBitsy_ATTCCT_L003_R2_009.fastq.gz
350M 002007_ItsyBitsy_ATTCCT_L003_R2_010.fastq.gz
351M 002007_ItsyBitsy_ATTCCT_L003_R2_011.fastq.gz
2K 002007_ItsyBitsy_ATTCCT_L003_R2_MANY.fastq.gz.stats
289 SampleSheet.csv

FastA, FastQ and SAM/BAM files in current directory and sub-directories

Files

Total Seqs/Reads Nucleotides Range Mean N50 File name
42,592,787 4,301,871,487 101-101 101 101 002007_ItsyBitsy_ATTCCT_L002_R1_MANY.fastq.gz
42,592,787 4,301,871,487 101-101 101 101 002007_ItsyBitsy_ATTCCT_L002_R2_MANY.fastq.gz
43,956,744 4,439,631,144 101-101 101 101 002007_ItsyBitsy_ATTCCT_L003_R1_MANY.fastq.gz
43,956,744 4,439,631,144 101-101 101 101 002007_ItsyBitsy_ATTCCT_L003_R2_MANY.fastq.gz