##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_R2_filtered.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 65793958 Filtered Sequences 0 Sequence length 30-101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.76893432980579 34.0 31.0 34.0 31.0 34.0 2 32.87381202997394 34.0 31.0 34.0 31.0 34.0 3 32.91134629717823 34.0 31.0 34.0 31.0 34.0 4 36.281236356079994 37.0 37.0 37.0 35.0 37.0 5 36.27516961359886 37.0 37.0 37.0 35.0 37.0 6 36.26568473050367 37.0 37.0 37.0 35.0 37.0 7 36.26797715984802 37.0 37.0 37.0 35.0 37.0 8 36.252628896410215 37.0 37.0 37.0 35.0 37.0 9 38.02482103295868 39.0 39.0 39.0 37.0 39.0 10-14 38.299770653712606 39.4 39.2 39.4 35.8 39.4 15-19 39.45282054926685 41.0 39.8 41.0 36.8 41.0 20-24 39.18610238952336 41.0 39.0 41.0 35.6 41.0 25-29 38.83028740724186 40.2 38.2 41.0 35.0 41.0 30-34 38.13833969130764 39.8 36.8 41.0 33.8 41.0 35-39 37.086983624628914 38.4 35.0 40.6 32.6 41.0 40-44 36.11542636419633 36.0 35.0 39.8 32.0 41.0 45-49 35.2018273425186 35.0 35.0 38.0 31.0 40.8 50-54 33.99286901138494 34.8 33.2 35.4 29.6 39.2 55-59 34.273624007822484 35.0 35.0 35.0 31.0 37.6 60-64 34.02081309771228 35.0 34.6 35.0 31.0 35.8 65-69 33.809941776777734 35.0 34.0 35.0 31.0 35.0 70-74 33.64395298176798 35.0 34.0 35.0 30.4 35.0 75-79 33.48075641589874 35.0 33.4 35.0 30.0 35.0 80-84 33.34583241509763 35.0 33.0 35.0 29.2 35.0 85-89 33.23505566024128 35.0 33.0 35.0 29.0 35.0 90-94 33.131069091257736 35.0 33.0 35.0 29.0 35.0 95-99 33.167100136869365 35.0 33.0 35.0 29.0 35.0 100-101 32.87902494001422 34.5 32.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 9.0 16 36.0 17 126.0 18 791.0 19 4113.0 20 13669.0 21 34749.0 22 74033.0 23 136747.0 24 225422.0 25 337487.0 26 471539.0 27 628849.0 28 808406.0 29 1020379.0 30 1278417.0 31 1628993.0 32 2146084.0 33 3036806.0 34 5035456.0 35 1.2127204E7 36 2.3786305E7 37 1.0779588E7 38 1950134.0 39 267442.0 40 1173.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.56937249465977 18.689985180706106 16.70647477994864 29.034167544685484 2 32.76275208913632 22.293078878870062 18.87685114121746 26.067317890776152 3 30.282502220724815 19.61066919563885 19.567583273152284 30.539245310484052 4 32.345663145607084 18.271566301805944 18.24424465630527 31.1385258962817 5 32.19756270656881 18.828182820206685 18.7435766622369 30.230677810987604 6 31.329534505921057 17.972375425255517 17.304260375247917 33.393829693575505 7 33.350817059738056 17.808523227675614 17.84679311145741 30.99386660112892 8 30.654917991631216 18.573258841804055 18.673430823702088 32.098392342862645 9 31.495713599380338 17.47100105491072 18.302698693009425 32.730586652699515 10-14 31.682742293497846 18.359848571219228 18.30901954059996 31.648389594682968 15-19 31.78980839831241 18.08112294368408 18.188423940398856 31.940644717604656 20-24 31.722979485365965 18.14628923026422 18.23010129312945 31.900629991240358 25-29 31.850215443756756 18.22275287931854 18.14381042327081 31.783221253653892 30-34 31.943806234248946 18.03368613162937 18.018108955179667 32.00439867894202 35-39 31.830401495775114 18.133163227048183 18.12146147965898 31.914973797517725 40-44 31.945638945961996 18.146301579820598 18.052466973016145 31.855592501201258 45-49 32.00515699393115 17.989520634062284 17.95983977627325 32.04548259573332 50-54 31.847172448405548 18.093064509078356 18.090547928245154 31.96921511427095 55-59 31.946783229648013 18.13030787262891 18.050731745175785 31.872177152547295 60-64 32.0005088274025 17.98914820295269 17.955552113067803 32.054790856577 65-69 31.82870974856524 18.106608848344756 18.10222616638538 31.962455236704624 70-74 31.924397184090438 18.157641209318935 18.06053674168833 31.857424864902296 75-79 31.97026648924562 18.03183647064925 17.978873463071757 32.01902357703337 80-84 31.789672228883564 18.141129798139666 18.13577265090292 31.933425322073848 85-89 31.863484013099658 18.20429740035041 18.104073443163397 31.82814514338654 90-94 31.875891196678808 18.08835977609704 18.047560729504927 31.988188297719223 95-99 31.642652237309534 18.210562901936264 18.225125383847658 31.921659476906544 100-101 32.07430889050969 18.142654275519256 17.95784099729713 31.825195836673924 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.60354003934525 2 58.830069979912466 3 60.82174753120887 4 63.48418904188878 5 62.42824051755642 6 64.72336419949656 7 64.34468366086698 8 62.75331033449386 9 64.22630025207987 10-14 63.33113188818081 15-19 63.730453115917065 20-24 63.623609476606326 25-29 63.63343669741065 30-34 63.94820491319096 35-39 63.74537529329284 40-44 63.801231447163254 45-49 64.05063958966447 50-54 63.81638756267649 55-59 63.8189603821953 60-64 64.0552996839795 65-69 63.791164985269866 70-74 63.78182204899273 75-79 63.98929006627899 80-84 63.72309755095742 85-89 63.691629156486194 90-94 63.86407949439803 95-99 63.56431171421608 100-101 63.89950472718362 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 297.0 1 220.0 2 121.5 3 99.5 4 99.0 5 104.5 6 123.5 7 159.0 8 200.5 9 238.0 10 279.0 11 365.0 12 480.0 13 584.0 14 755.0 15 996.5 16 1287.0 17 1665.5 18 2196.5 19 2824.5 20 3758.5 21 4952.0 22 6424.5 23 8340.0 24 10915.0 25 14397.0 26 18511.5 27 23346.5 28 29371.5 29 36579.0 30 44875.5 31 54483.5 32 65545.5 33 78007.5 34 91464.0 35 105065.0 36 119223.5 37 134400.0 38 150035.5 39 165714.5 40 181600.0 41 198609.0 42 217749.5 43 239215.0 44 264204.5 45 294320.0 46 331462.0 47 378375.0 48 436692.0 49 507460.5 50 590468.5 51 688009.0 52 800807.0 53 929679.0 54 1075443.0 55 1235121.5 56 1408969.0 57 1597301.0 58 1802235.0 59 2022814.5 60 2254880.5 61 2498814.0 62 2744938.5 63 2984049.5 64 3206097.0 65 3390869.0 66 3528368.5 67 3601567.0 68 3596040.0 69 3511766.5 70 3348489.5 71 3107348.0 72 2801655.5 73 2452176.0 74 2076033.5 75 1700124.5 76 1341137.0 77 1013931.5 78 734740.0 79 507009.5 80 334015.5 81 209596.5 82 123968.5 83 70287.0 84 39270.0 85 22010.5 86 12619.5 87 7870.5 88 5161.0 89 3229.0 90 2087.0 91 1478.0 92 969.5 93 553.0 94 375.5 95 267.0 96 153.0 97 97.0 98 74.5 99 56.0 100 52.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.009674140595098413 3 0.013876654145050826 4 0.022207206321285613 5 0.024683117559214176 6 0.03169743945181106 7 0.03682101022102972 8 0.045688085826969094 9 0.03998391463240439 10-14 0.01504393458134864 15-19 0.005627264436652375 20-24 0.0023093305923318976 25-29 0.0030157784397163035 30-34 0.011191714841859372 35-39 0.0010288384076309167 40-44 3.18326797124931E-4 45-49 2.8779499806292538E-5 50-54 2.9696976864628465E-4 55-59 6.494124169928456E-4 60-64 3.0807403606891996E-7 65-69 1.0350348514308966E-4 70-74 0.0 75-79 3.426030517042915E-6 80-84 3.1322851078574186E-7 85-89 0.0 90-94 0.0 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 30-31 49891.0 32-33 53070.0 34-35 54888.0 36-37 56288.0 38-39 55656.0 40-41 56860.0 42-43 57022.0 44-45 56776.0 46-47 58161.0 48-49 58734.0 50-51 45640.0 52-53 40094.0 54-55 48662.0 56-57 54480.0 58-59 61371.0 60-61 65515.0 62-63 70829.0 64-65 75702.0 66-67 82653.0 68-69 89561.0 70-71 97890.0 72-73 107144.0 74-75 116842.0 76-77 128695.0 78-79 141026.0 80-81 155025.0 82-83 172725.0 84-85 196196.0 86-87 230697.0 88-89 272682.0 90-91 337963.0 92-93 426113.0 94-95 561398.0 96-97 759451.0 98-99 1118825.0 100-101 5.9779433E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 1.9516998030807386 #Duplication Level Relative count 1 100.0 2 1.8228436564938806 3 0.0147825688026629 4 0.013253337547215015 5 0.018350775065374636 6 0.014272825050846939 7 0.0147825688026629 8 0.013253337547215015 9 0.009175387532687318 10++ 0.028035906349877918 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GATCG 20738280 3.1025941 4.3475556 1 CGATC 20597165 3.0904622 3.4453087 6 TTTTT 3717320 3.0425785 3.4339151 10-14 ATCGA 11588525 3.040125 3.707176 2 TCGAT 11502600 3.030797 3.3783877 5 AAAAA 3775010 3.0230284 3.747382 1 >>END_MODULE