##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_R1_filtered.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 65793958 Filtered Sequences 0 Sequence length 30-101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.808968644202864 34.0 31.0 34.0 31.0 34.0 2 33.023823084180464 34.0 31.0 34.0 31.0 34.0 3 33.060930366888705 34.0 31.0 34.0 31.0 34.0 4 36.452834027708136 37.0 37.0 37.0 35.0 37.0 5 36.38808469312638 37.0 37.0 37.0 35.0 37.0 6 36.356640270828514 37.0 37.0 37.0 35.0 37.0 7 36.35165876477594 37.0 37.0 37.0 35.0 37.0 8 36.33267042545153 37.0 37.0 37.0 35.0 37.0 9 38.13072688224654 39.0 39.0 39.0 37.0 39.0 10-14 38.36870750958621 39.4 38.6 39.4 36.2 39.4 15-19 39.509482071286854 41.0 39.8 41.0 37.0 41.0 20-24 39.208474039515906 40.8 39.0 41.0 35.8 41.0 25-29 37.4845815781443 40.0 37.0 41.0 28.4 41.0 30-34 36.909670075323845 39.2 35.4 41.0 30.6 41.0 35-39 36.613913876498124 38.0 35.0 40.2 31.4 41.0 40-44 34.80032275581945 35.8 34.4 39.4 26.0 41.0 45-49 34.88939629884949 35.0 34.6 37.8 30.0 40.6 50-54 34.278616989756316 35.0 34.2 35.8 30.2 39.4 55-59 33.65796344228665 35.0 33.2 35.0 29.0 37.2 60-64 33.6141166572981 35.0 33.0 35.0 30.0 35.6 65-69 33.39622116185022 35.0 33.0 35.0 29.4 35.0 70-74 33.04142447321772 35.0 33.0 35.0 29.0 35.0 75-79 32.73274029792265 34.4 32.6 35.0 28.2 35.0 80-84 33.08393081448533 35.0 33.0 35.0 29.0 35.0 85-89 32.928670741436825 35.0 33.0 35.0 28.2 35.0 90-94 32.95791210283623 35.0 33.0 35.0 29.0 35.0 95-99 33.05223000958345 35.0 33.0 35.0 29.0 35.0 100-101 32.663748820441484 34.0 32.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 10.0 20 153.0 21 2329.0 22 16353.0 23 64532.0 24 166472.0 25 325971.0 26 529668.0 27 764061.0 28 1015298.0 29 1298206.0 30 1648348.0 31 2157593.0 32 3024278.0 33 4581152.0 34 7247143.0 35 1.3159173E7 36 2.0020343E7 37 8154625.0 38 1453821.0 39 164067.0 40 362.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.63089486119683 18.781068012354567 16.869783088593028 28.718254037855573 2 32.38025707872661 21.94267431748378 19.867671381422703 25.809397222366908 3 29.772237289208796 19.707629076025935 20.32232686658442 30.19780676818085 4 31.94841671534262 18.659586765342205 18.932809459423083 30.45918705989209 5 32.10845591627122 18.85061695178758 18.962990492227267 30.077936639713936 6 31.263562225577008 18.04258986820644 17.58993280203632 33.10391510418024 7 33.2701750516362 17.969678917933468 17.992450005819684 30.767696024610647 8 30.633229270079788 18.54767880053667 18.80237695990261 32.01671496948094 9 31.416257097650213 17.48380451591011 18.472253941615733 32.62768444482395 10-14 31.676893531855434 18.36041066851342 18.39023226388323 31.572463535747918 15-19 31.76840432673164 18.073660502382303 18.23977697161797 31.91815819926809 20-24 31.76304210600408 18.128660984667334 18.268894916521493 31.839401992807097 25-29 32.689162191469315 18.027425092918804 17.973834557020357 31.30957815859152 30-34 32.35361325876618 18.031621135702018 17.940939875122055 31.673825730409742 35-39 31.954893489228485 18.11164770564651 18.143109581444737 31.790349223680263 40-44 32.73708571781459 18.001541673415076 17.893871371365695 31.367501237404642 45-49 32.076892662882464 18.01877890381284 18.00046031912414 31.90386811418055 50-54 31.96063889455047 18.138281060050502 18.119926724202966 31.781153321196058 55-59 31.99940539121973 18.192538752734162 18.08193853440975 31.726117321636355 60-64 32.01997542209909 18.000926289127566 17.998455916862312 31.980642371911035 65-69 31.85743966350133 18.135809034563387 18.144503333575972 31.86224796835931 70-74 31.974155438420702 18.2052920752895 18.094654683428896 31.725897802860903 75-79 31.983741547737672 18.049235693743235 18.034013500815878 31.93300925770321 80-84 31.803047698259405 18.14885742286157 18.181106516507636 31.866988362371384 85-89 31.87931987820513 18.224602206504517 18.157502757651812 31.738575157638536 90-94 31.866431590591755 18.07467793563646 18.107505207719964 31.95138526605183 95-99 31.64490470270164 18.18465208947377 18.285513808177686 31.8849293996469 100-101 32.275322382574714 17.954071887525515 17.993809865755836 31.776795864143935 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.3491488990524 2 58.18965430109352 3 59.97004405738965 4 62.40760377523471 5 62.18639255598516 6 64.36747732975724 7 64.03787107624684 8 62.64994423956072 9 64.04394154247416 10-14 63.24935706760335 15-19 63.686562525999726 20-24 63.602444098811176 25-29 63.99874035006084 30-34 64.02743898917592 35-39 63.745242712908755 40-44 64.10458695521923 45-49 63.98076077706302 50-54 63.74179221574653 55-59 63.72552271285608 60-64 64.00061779401011 65-69 63.71968763186063 70-74 63.70005324128161 75-79 63.916750805440884 80-84 63.670036060630785 85-89 63.61789503584367 90-94 63.81781685664358 95-99 63.529834102348545 100-101 64.05211824671865 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 100.0 1 91.0 2 89.5 3 88.5 4 76.5 5 82.0 6 104.5 7 128.5 8 146.0 9 174.0 10 232.5 11 325.5 12 437.0 13 556.0 14 737.5 15 985.0 16 1252.5 17 1576.5 18 2058.5 19 2679.0 20 3496.5 21 4632.5 22 6095.0 23 7874.5 24 10303.5 25 13762.5 26 17688.5 27 22284.0 28 28317.5 29 35270.0 30 43332.5 31 53354.0 32 64529.5 33 76844.5 34 90330.5 35 103918.0 36 117988.5 37 133256.0 38 149379.0 39 165461.5 40 181958.5 41 199470.0 42 218339.5 43 239385.5 44 264471.0 45 295390.0 46 333772.0 47 381685.0 48 439941.0 49 510275.0 50 594936.0 51 696443.0 52 811763.0 53 942493.5 54 1090699.0 55 1252579.0 56 1428314.0 57 1617877.5 58 1824732.0 59 2050582.5 60 2288060.5 61 2533660.5 62 2778992.5 63 3017585.0 64 3237765.0 65 3421140.0 66 3558066.5 67 3624776.5 68 3611837.5 69 3523133.5 70 3352600.5 71 3102727.5 72 2791001.0 73 2434918.5 74 2055075.5 75 1678518.5 76 1321710.5 77 998659.0 78 722954.0 79 499492.5 80 329913.0 81 208328.5 82 124448.5 83 71330.5 84 40711.5 85 23396.0 86 13427.0 87 8270.0 88 5405.5 89 3364.5 90 2159.0 91 1501.0 92 941.5 93 494.0 94 320.5 95 200.5 96 96.0 97 66.5 98 45.0 99 21.0 100 11.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 4.1037202838594994E-5 3 1.5198964014294442E-6 4 1.3679067612865E-5 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.042924427802322E-5 15-19 0.0 20-24 0.0015761325682823338 25-29 0.21592773002043741 30-34 0.2501249427546314 35-39 0.01859700604393092 40-44 0.31462839942052745 45-49 0.0 50-54 6.739379679111532E-4 55-59 0.09891368367769224 60-64 0.012522486389747792 65-69 0.01202769431694019 70-74 6.483635668277773E-5 75-79 0.0 80-84 3.7105077361456184E-4 85-89 0.0017599847690327297 90-94 0.006762005151009197 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 30-31 55077.0 32-33 56077.0 34-35 56946.0 36-37 61631.0 38-39 66480.0 40-41 64427.0 42-43 67178.0 44-45 55942.0 46-47 60734.0 48-49 66580.0 50-51 71685.0 52-53 76041.0 54-55 76671.0 56-57 80920.0 58-59 85271.0 60-61 88670.0 62-63 92311.0 64-65 100375.0 66-67 110121.0 68-69 117667.0 70-71 120448.0 72-73 126231.0 74-75 143130.0 76-77 94557.0 78-79 135152.0 80-81 161479.0 82-83 188865.0 84-85 213227.0 86-87 261484.0 88-89 275821.0 90-91 344086.0 92-93 440972.0 94-95 586563.0 96-97 918598.0 98-99 1264378.0 100-101 5.9008163E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 1.6213702903767742 #Duplication Level Relative count 1 100.0 2 1.5134190158202598 3 0.014737794311211395 4 0.019311592545725276 5 0.014229594507376521 6 0.019819792349560154 7 0.015245994115046272 8 0.013721394703541645 9 0.007622997057523136 10++ 0.021852591564899656 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GATCG 20511145 3.0700524 4.399213 1 CGATC 20179775 3.055367 3.453399 1 ATCGA 11428165 3.0110164 3.704325 2 >>END_MODULE