Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_009.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1814064 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 123965 | 3.5807302 | 4.4559245 | 2 |
TTTTT | 109515 | 3.264511 | 3.6540823 | 80-84 |
GATCG | 577830 | 3.0821688 | 4.3135033 | 1 |
CGATC | 573655 | 3.073582 | 3.400914 | 6 |
ATCGA | 322980 | 3.0361834 | 3.844308 | 2 |
TCGAT | 320610 | 3.0329401 | 3.57617 | 8 |