##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_009.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1814064 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33276995739952 34.0 31.0 34.0 31.0 34.0 2 32.475838779668194 34.0 31.0 34.0 31.0 34.0 3 32.53990818405525 34.0 31.0 34.0 31.0 34.0 4 35.96641408461885 37.0 37.0 37.0 35.0 37.0 5 35.966767986135 37.0 37.0 37.0 35.0 37.0 6 35.9428680575768 37.0 37.0 37.0 35.0 37.0 7 35.9474467273481 37.0 37.0 37.0 35.0 37.0 8 35.90052335529507 37.0 37.0 37.0 35.0 37.0 9 37.61247894230854 39.0 38.0 39.0 35.0 39.0 10-14 37.868945968830204 39.4 38.2 39.4 35.2 39.4 15-19 38.905420977429685 41.0 39.0 41.0 35.4 41.0 20-24 38.60081728097796 40.0 38.0 41.0 34.2 41.0 25-29 38.129136348000955 40.0 37.8 41.0 33.2 41.0 30-34 37.422117080764515 39.6 36.0 41.0 32.4 41.0 35-39 36.3580453611339 38.0 35.0 40.4 31.0 41.0 40-44 35.38647721359335 35.8 35.0 39.6 30.2 41.0 45-49 34.44203986187919 35.0 34.2 37.6 29.4 40.6 50-54 33.18058117023435 34.8 32.8 35.2 26.8 39.2 55-59 33.31062123497296 35.0 33.8 35.0 28.2 37.0 60-64 33.06237442559909 35.0 33.6 35.0 27.4 35.6 65-69 32.773640952028146 35.0 33.0 35.0 28.2 35.0 70-74 32.501337218532534 35.0 33.0 35.0 26.6 35.0 75-79 32.26435252559998 35.0 33.0 35.0 27.0 35.0 80-84 31.958745887686433 35.0 33.0 35.0 25.8 35.0 85-89 31.655201911288685 35.0 33.0 35.0 24.4 35.0 90-94 31.22560427857011 35.0 32.6 35.0 23.8 35.0 95-99 30.618511364538403 35.0 31.6 35.0 20.2 35.0 100-101 29.38502969024246 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2987.0 3 670.0 4 824.0 5 1148.0 6 1577.0 7 1905.0 8 2347.0 9 2653.0 10 2846.0 11 2871.0 12 2965.0 13 2896.0 14 2899.0 15 2999.0 16 3266.0 17 3619.0 18 4052.0 19 4795.0 20 5605.0 21 6709.0 22 8187.0 23 9888.0 24 12133.0 25 14568.0 26 17208.0 27 21385.0 28 25480.0 29 30888.0 30 38434.0 31 47832.0 32 61753.0 33 85215.0 34 136806.0 35 321027.0 36 610435.0 37 262083.0 38 45714.0 39 5365.0 40 30.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.532021076256676 18.68800026469396 16.76488834602118 29.015090313028182 2 32.81107993399864 22.29658037077234 18.85709779318986 26.035241902039157 3 30.28501093820397 19.639521796170552 19.507667771975807 30.567799493649666 4 32.35081492983889 18.3053032613185 18.217625997466733 31.126255811375874 5 32.19287261675745 18.870643943466582 18.728996119985467 30.2074873197905 6 31.31926351200117 18.02221283793096 17.24808231518061 33.41044133488725 7 33.36488107549121 17.822488796966564 17.78994829369183 31.022681833850395 8 30.68654305883599 18.621651705684364 18.589659436781623 32.102145798698025 9 31.48755005191386 17.569118258783703 18.244439810263387 32.69889187903905 10-14 31.721925572463945 18.355151409012215 18.27780974767407 31.645113270849773 15-19 31.80859744760276 18.06848308744845 18.182871916163972 31.94004754878482 20-24 31.76007737248476 18.143069187219513 18.2123943513499 31.884459088945828 25-29 31.88176257616005 18.260426371663794 18.099088863764255 31.75872218841191 30-34 31.97347594894494 18.043033482936504 18.001180915140857 31.982309652977698 35-39 31.841165728281894 18.11590039782339 18.098246068272744 31.944687805621975 40-44 31.973671487224465 18.12526937638313 18.04879377266304 31.85226536372937 45-49 32.07793814405709 17.958402823305057 17.925876775453617 32.03778225718423 50-54 31.90089958566838 18.06627453505676 18.061930095542383 31.970895783732477 55-59 31.988091558985033 18.097449919067188 17.9955079836324 31.918950538315382 60-64 32.07902257031726 17.956929854735005 17.884220181867892 32.079827393079846 65-69 31.903946057029962 18.07057523880084 18.03407156528105 31.991407138888157 70-74 32.00691927076443 18.11091560165463 17.974172906799318 31.90799222078163 75-79 32.089299568403575 17.953593268740686 17.899846300207525 32.05726086264822 80-84 31.94002455537484 18.07780322889067 18.021177687772763 31.960994527961727 85-89 32.04125102532215 18.099934732181445 17.981372211785253 31.877442030711155 90-94 32.086001375916176 17.958506425352137 17.882665661189463 32.07282653754223 95-99 31.960488384802755 18.041656013582145 18.009197870419463 31.988657731195637 100-101 32.17387972879596 18.15203313454335 17.912046386596682 31.762040750064013 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.54711138928486 2 58.846321836037795 3 60.85281043185364 4 63.47707074121477 5 62.40035993654796 6 64.72970484688842 7 64.38756290934161 8 62.78868885753401 9 64.18644193095291 10-14 63.367038843313715 15-19 63.74864499638757 20-24 63.64453646143059 25-29 63.64048476457196 30-34 63.955785601922635 35-39 63.78585353390387 40-44 63.82593685095384 45-49 64.11572040124133 50-54 63.87179536940085 55-59 63.90704209730041 60-64 64.1588499633971 65-69 63.89535319591811 70-74 63.91491149154606 75-79 64.1465604310518 80-84 63.901019083336564 85-89 63.918693056033305 90-94 64.15882791345841 95-99 63.94914611599839 100-101 63.93592047885998 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 55.0 1 38.5 2 24.0 3 24.0 4 17.5 5 12.0 6 16.0 7 19.5 8 17.0 9 18.0 10 19.0 11 20.5 12 31.0 13 38.0 14 37.5 15 46.0 16 56.0 17 71.5 18 87.5 19 101.0 20 133.5 21 170.5 22 188.5 23 239.5 24 328.0 25 412.5 26 508.0 27 653.5 28 870.5 29 1075.5 30 1267.0 31 1540.0 32 1817.5 33 2131.5 34 2526.0 35 2894.0 36 3271.5 37 3694.5 38 4086.5 39 4500.5 40 5002.5 41 5439.5 42 5943.0 43 6548.0 44 7172.0 45 7941.5 46 8891.0 47 10160.0 48 11847.5 49 13664.0 50 15760.5 51 18389.0 52 21497.5 53 24936.0 54 28709.5 55 32944.5 56 37632.5 57 42577.5 58 48018.0 59 53962.0 60 60299.5 61 66712.5 62 73014.5 63 79786.5 64 85881.0 65 90614.5 66 94369.5 67 96542.5 68 96640.5 69 94510.5 70 90009.0 71 83338.5 72 75420.5 73 66122.0 74 55934.0 75 45917.0 76 36113.0 77 27471.0 78 20032.5 79 13690.0 80 8930.0 81 5552.0 82 3225.0 83 1741.5 84 886.5 85 466.5 86 273.0 87 171.0 88 104.0 89 60.5 90 42.5 91 29.5 92 21.5 93 21.0 94 17.0 95 14.0 96 9.0 97 4.5 98 5.0 99 3.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03577602554264899 2 0.042335882306247186 3 0.03831176849328359 4 0.032799283817990986 5 0.022656312015452595 6 0.008709725786962313 7 0.05176223110099754 8 0.06207057744379471 9 0.07971052840473103 10-14 0.030450965346316337 15-19 0.033085933021106205 20-24 0.016129530159906154 25-29 0.019326771271575865 30-34 0.030605314917224527 35-39 0.01899602219105831 40-44 0.008390001675795341 45-49 0.007342629587489747 50-54 0.013847361504335017 55-59 0.004972261177113928 60-64 0.0 65-69 0.0 70-74 0.0 75-79 4.520237433739934E-4 80-84 0.0022931936249217227 85-89 0.0 90-94 0.0 95-99 0.0019514195750535814 100-101 3.0318665714109316E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1814064.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.15591580546505127 #Duplication Level Relative count 1 100.0 2 0.09709904102184228 3 0.002002042082924583 4 0.0 5 5.005105207311457E-4 6 0.0 7 0.0 8 0.0 9 5.005105207311457E-4 10++ 0.002002042082924583 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 123965 3.5807302 4.4559245 2 TTTTT 109515 3.264511 3.6540823 80-84 GATCG 577830 3.0821688 4.3135033 1 CGATC 573655 3.073582 3.400914 6 ATCGA 322980 3.0361834 3.844308 2 TCGAT 320610 3.0329401 3.57617 8 >>END_MODULE