Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_008.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 277230 | 3.6524448 | 4.2957087 | 60-64 |
TTTTT | 245605 | 3.337521 | 3.652315 | 90-94 |
GATCG | 1277900 | 3.0929337 | 4.3522716 | 1 |
CGATC | 1266735 | 3.079908 | 3.4410114 | 6 |
TCGAT | 705125 | 3.0316148 | 3.3920078 | 5 |
ATCGA | 709275 | 3.030637 | 3.675919 | 2 |