##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63317075 34.0 31.0 34.0 31.0 34.0 2 32.7786165 34.0 31.0 34.0 31.0 34.0 3 32.81665775 34.0 31.0 34.0 31.0 34.0 4 36.198184 37.0 37.0 37.0 35.0 37.0 5 36.19771025 37.0 37.0 37.0 35.0 37.0 6 36.20229625 37.0 37.0 37.0 35.0 37.0 7 36.17489625 37.0 37.0 37.0 35.0 37.0 8 36.144881 37.0 37.0 37.0 35.0 37.0 9 37.915616 39.0 39.0 39.0 37.0 39.0 10-14 38.18027345 39.4 39.2 39.4 35.4 39.4 15-19 39.3083836 41.0 39.8 41.0 36.6 41.0 20-24 39.01682985 41.0 39.0 41.0 35.6 41.0 25-29 38.60382505 40.2 38.2 41.0 34.8 41.0 30-34 37.82431645 39.8 36.6 41.0 33.2 41.0 35-39 36.70242555 38.2 35.0 40.6 32.2 41.0 40-44 35.698046700000006 36.0 35.0 39.6 31.0 41.0 45-49 34.710012750000004 35.0 34.6 38.0 30.6 40.6 50-54 33.413235 34.8 33.2 35.2 28.0 39.2 55-59 33.5924573 35.0 34.0 35.0 30.0 37.4 60-64 33.3255817 35.0 34.0 35.0 30.0 35.6 65-69 33.03304695 35.0 34.0 35.0 29.0 35.0 70-74 32.7436826 35.0 33.2 35.0 29.0 35.0 75-79 32.456082200000004 35.0 33.0 35.0 27.2 35.0 80-84 32.13340615 35.0 33.0 35.0 27.0 35.0 85-89 31.797557599999998 35.0 33.0 35.0 25.2 35.0 90-94 31.3832724 35.0 33.0 35.0 24.0 35.0 95-99 30.75244465 35.0 32.2 35.0 21.2 35.0 100-101 29.6248515 34.0 30.5 35.0 9.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7097.0 3 1372.0 4 1920.0 5 2336.0 6 3056.0 7 3868.0 8 4500.0 9 5029.0 10 5435.0 11 5824.0 12 6057.0 13 6070.0 14 5958.0 15 6235.0 16 6489.0 17 7188.0 18 8300.0 19 9222.0 20 10761.0 21 12708.0 22 14974.0 23 18038.0 24 21980.0 25 26451.0 26 32074.0 27 38466.0 28 46954.0 29 57777.0 30 72772.0 31 91514.0 32 121610.0 33 173222.0 34 289105.0 35 706067.0 36 1400862.0 37 641204.0 38 113292.0 39 14137.0 40 76.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.58195583842487 18.6933286225518 16.675516063281275 29.04919947574206 2 32.83588139926467 22.29495340563857 18.844160559557732 26.025004635539034 3 30.25942317489008 19.59537971433976 19.553969888676377 30.59122722209378 4 32.40102250701366 18.249803657536713 18.2487278084228 31.10044602702683 5 32.196810036819585 18.848154180469738 18.712697940589866 30.242337842120815 6 31.36278316545053 17.961821512758466 17.22843940900252 33.44695591278848 7 33.42308210185309 17.776312832271916 17.815631102027783 30.984973963847214 8 30.656872183597994 18.59001797791285 18.624411812855485 32.12869802563367 9 31.549914032624788 17.431609804512167 18.257282189067134 32.76119397379591 10-14 31.723023064549228 18.331583498255476 18.275578435033502 31.669815002161794 15-19 31.81504888488112 18.05059205798247 18.155492444645343 31.978866612491068 20-24 31.783371195911393 18.13055323716914 18.177358936989883 31.908716629929586 25-29 31.884685307332063 18.20721471448863 18.09536491927395 31.812735058905357 30-34 31.980945828459916 18.032656788486438 17.97052057467742 32.015876808376234 35-39 31.868193987249494 18.10555032320486 18.082018501994476 31.944237187551167 40-44 32.0042768650967 18.108616528769208 17.992222099296974 31.894884506837123 45-49 32.06390000438107 17.94736774720387 17.896250264314546 32.092481984100516 50-54 31.914796772334302 18.046676335945293 18.02683892568069 32.011687966039716 55-59 32.00285174282925 18.087732999976545 17.972691101751217 31.936724155442985 60-64 32.084437833775134 17.931897172758866 17.856272142508857 32.12739285095714 65-69 31.928125 18.042475 17.998330000000003 32.03107 70-74 32.05408660270433 18.078310903915547 17.947685897384293 31.91991659599583 75-79 32.09912494896724 17.919598108043715 17.866786536899472 32.11449040608958 80-84 31.95111972133905 18.014756733224583 18.002200428624533 32.03192311681184 85-89 32.07308622558018 18.05228631830021 17.930001275500445 31.944626180619164 90-94 32.153238229857344 17.892136838205257 17.847311770967657 32.10731316096974 95-99 32.00480729324489 17.990267406311787 17.973941410426036 32.03098389001729 100-101 32.210217148851605 18.09349173463324 17.873797808585902 31.822493307929257 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.63115531416692 2 58.860886034803706 3 60.850650396983866 4 63.5014685340405 5 62.439147878940396 6 64.80973907823902 7 64.40805606570031 8 62.785570209231665 9 64.31110800642071 10-14 63.39283806671102 15-19 63.79391549737219 20-24 63.69208782584098 25-29 63.697420366237424 30-34 63.99682263683615 35-39 63.812431174800665 40-44 63.89916137193382 45-49 64.1563819884816 50-54 63.92648473837402 55-59 63.93957589827224 60-64 64.21183068473228 65-69 63.959195 70-74 63.97400319870016 75-79 64.2136153550568 80-84 63.98304283815088 85-89 64.01771240619935 90-94 64.26055139082708 95-99 64.03579118326218 100-101 64.03271045678086 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 119.0 1 71.5 2 23.5 3 25.5 4 24.0 5 17.5 6 22.0 7 29.5 8 26.0 9 28.0 10 38.5 11 51.0 12 61.0 13 73.0 14 99.0 15 127.5 16 154.5 17 185.5 18 239.5 19 293.5 20 332.0 21 397.5 22 496.0 23 621.0 24 758.5 25 979.5 26 1211.0 27 1479.5 28 1862.0 29 2238.5 30 2715.0 31 3325.5 32 3998.0 33 4779.0 34 5588.5 35 6375.0 36 7184.5 37 8133.5 38 9150.0 39 10101.0 40 10994.5 41 11963.5 42 13126.0 43 14393.5 44 15884.0 45 17591.0 46 19672.0 47 22313.5 48 25786.5 49 29941.0 50 34727.5 51 40356.5 52 47030.5 53 55062.5 54 63326.5 55 72332.5 56 82864.0 57 93992.5 58 105624.0 59 118632.0 60 132332.0 61 146239.5 62 160704.0 63 174670.5 64 187713.0 65 198613.0 66 206792.5 67 211627.5 68 212099.0 69 207674.0 70 197872.0 71 184060.0 72 166878.5 73 146606.5 74 124133.0 75 101694.5 76 80621.0 77 61426.5 78 45006.5 79 31232.0 80 20641.0 81 12955.5 82 7664.5 83 4404.5 84 2496.0 85 1463.0 86 894.5 87 599.5 88 459.0 89 347.0 90 239.0 91 197.5 92 176.5 93 134.5 94 98.0 95 80.5 96 57.5 97 38.5 98 31.5 99 21.0 100 12.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.08735 2 0.092525 3 0.0841 4 0.078925 5 0.059975 6 0.041875 7 0.11005 8 0.12745 9 0.151075 10-14 0.071535 15-19 0.071865 20-24 0.044225 25-29 0.048990000000000006 30-34 0.07437500000000001 35-39 0.050235 40-44 0.02958 45-49 0.024420000000000004 50-54 0.037355 55-59 0.019035 60-64 3.9999999999999996E-5 65-69 0.0 70-74 4.9999999999999996E-6 75-79 0.002975 80-84 0.01039 85-89 3.5E-5 90-94 1.5000000000000001E-4 95-99 0.0060999999999999995 100-101 0.002925 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.24984135074227815 #Duplication Level Relative count 1 100.0 2 0.1773307217961498 3 0.004508408181258046 4 0.0010018684847240102 5 0.0010018684847240102 6 5.009342423620051E-4 7 0.0 8 0.0 9 0.0 10++ 0.0025046712118100257 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 277230 3.6524448 4.2957087 60-64 TTTTT 245605 3.337521 3.652315 90-94 GATCG 1277900 3.0929337 4.3522716 1 CGATC 1266735 3.079908 3.4410114 6 TCGAT 705125 3.0316148 3.3920078 5 ATCGA 709275 3.030637 3.675919 2 >>END_MODULE