FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_006.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4000000 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 63 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 272430 | 3.5728571 | 4.3666277 | 1 |
| TTTTT | 248750 | 3.365014 | 3.745863 | 10-14 |
| GATCG | 1273835 | 3.0808265 | 4.3139267 | 1 |
| CGATC | 1260190 | 3.0640924 | 3.4683807 | 1 |
| TCGAT | 703205 | 3.0180907 | 3.4071896 | 5 |
| ATCGA | 706540 | 3.0136614 | 3.670774 | 2 |