##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5546215 34.0 31.0 34.0 31.0 34.0 2 32.7169245 34.0 31.0 34.0 31.0 34.0 3 32.75978325 34.0 31.0 34.0 31.0 34.0 4 36.13912325 37.0 37.0 37.0 35.0 37.0 5 36.145469 37.0 37.0 37.0 35.0 37.0 6 36.14139075 37.0 37.0 37.0 35.0 37.0 7 36.14193475 37.0 37.0 37.0 35.0 37.0 8 36.11802375 37.0 37.0 37.0 35.0 37.0 9 37.8684455 39.0 39.0 39.0 35.0 39.0 10-14 38.041673349999996 39.4 38.6 39.4 35.2 39.4 15-19 39.24445475 41.0 39.6 41.0 36.0 41.0 20-24 38.9452206 41.0 39.0 41.0 35.6 41.0 25-29 38.52414395 40.0 38.2 41.0 34.8 41.0 30-34 37.7654629 39.8 36.6 41.0 33.2 41.0 35-39 36.58177465 38.2 35.0 40.6 31.8 41.0 40-44 35.615238899999994 36.0 35.0 39.6 31.0 41.0 45-49 34.632740999999996 35.0 34.6 38.0 30.4 40.6 50-54 33.32301105 34.8 33.2 35.2 27.8 39.2 55-59 33.505923900000006 35.0 34.0 35.0 30.0 37.4 60-64 33.208050300000004 35.0 34.0 35.0 29.4 35.6 65-69 32.911571249999994 35.0 33.8 35.0 29.0 35.0 70-74 32.6157139 35.0 33.0 35.0 28.2 35.0 75-79 32.17211435 35.0 33.0 35.0 27.0 35.0 80-84 31.975606600000003 35.0 33.0 35.0 26.2 35.0 85-89 31.6481827 35.0 33.0 35.0 24.4 35.0 90-94 31.1936914 35.0 32.8 35.0 23.8 35.0 95-99 30.526570299999996 35.0 31.6 35.0 19.0 35.0 100-101 29.303158625000002 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 8169.0 3 1421.0 4 2024.0 5 2637.0 6 3326.0 7 4138.0 8 4970.0 9 5571.0 10 5887.0 11 6277.0 12 6347.0 13 6437.0 14 6507.0 15 6511.0 16 6993.0 17 7778.0 18 8601.0 19 9962.0 20 11478.0 21 13222.0 22 15936.0 23 19475.0 24 23193.0 25 27990.0 26 33366.0 27 40681.0 28 49202.0 29 60616.0 30 74944.0 31 96117.0 32 127366.0 33 179642.0 34 300162.0 35 714984.0 36 1369092.0 37 616290.0 38 109209.0 39 13413.0 40 66.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.5613877861346 18.752125667857 16.72024371571872 28.96624283028968 2 32.81093311530369 22.316830201409633 18.85275666595842 26.01948001732825 3 30.320062439489227 19.624947668891537 19.533510552178587 30.521479339440656 4 32.33945711848729 18.278352414475236 18.257429231588603 31.12476123544888 5 32.198241186854816 18.814071005606234 18.75574416762898 30.231943639909968 6 31.34303749646602 17.95992404132192 17.283976872133724 33.413061590078335 7 33.39855752773946 17.819691968316054 17.825747309126648 30.95600319481783 8 30.679254321124837 18.593018777118477 18.640545331548395 32.08718157020829 9 31.54419312231886 17.494983444176878 18.269123671460584 32.691699762043676 10-14 31.735981014673587 18.3940535830091 18.26339613998982 31.6065692623275 15-19 31.797855819784086 18.075095434139413 18.17510955177847 31.951939194298035 20-24 31.75212540183437 18.160657720396806 18.205834232411945 31.881382645356876 25-29 31.866918480599455 18.21588771588794 18.1325588382654 31.784634965247204 30-34 31.968702449637576 18.029141258527982 17.998452873116282 32.00370341871815 35-39 31.90524905099178 18.127353455123036 18.08062628016532 31.886771213719868 40-44 31.981829421014098 18.135780216614585 18.014399628706435 31.867990733664886 45-49 32.04654274045909 17.968194900526175 17.91536543348568 32.06989692552906 50-54 31.906419832921852 18.064495155874006 18.047245701202336 31.98183931000181 55-59 32.0055016780118 18.076658380806148 18.009272828212605 31.908567112969454 60-64 32.077249623174886 17.951430385429116 17.89967036990111 32.071649621494885 65-69 31.903549973342436 18.063667449618507 18.031162373231577 32.00162020380748 70-74 32.02517241762069 18.089957662970363 17.97757258430081 31.907297335108137 75-79 32.14305750210377 17.98114880206242 17.859562525406517 32.01623117042729 80-84 31.96366579564693 18.019902574335376 18.01096668789544 32.00546494212226 85-89 32.070243017560756 18.06861951715488 17.972014493003623 31.88912297228074 90-94 32.149925 17.903164999999998 17.86316 32.08375 95-99 32.00555628508995 18.01133079708728 17.98009194533686 32.003020972485906 100-101 32.24153360910949 18.102332363228975 17.88736847118745 31.768765556474087 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.52763061642428 2 58.83041313263194 3 60.84154177892987 4 63.46421835393616 5 62.43018482676479 6 64.75609908654437 7 64.3545607225573 8 62.76643589133313 9 64.23589288436253 10-14 63.34255027700109 15-19 63.749795014082125 20-24 63.63350804719124 25-29 63.65155344584665 30-34 63.97240586835573 35-39 63.792020264711645 40-44 63.84982015467898 45-49 64.11643966598814 50-54 63.888259142923665 55-59 63.91406879098125 60-64 64.14889924466978 65-69 63.90517017714992 70-74 63.93246975272883 75-79 64.15928867253106 80-84 63.969130737769184 85-89 63.9593659898415 90-94 64.233675 95-99 64.00857725757587 100-101 64.01029916558358 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 118.0 1 81.0 2 41.5 3 36.0 4 34.5 5 33.5 6 34.0 7 35.5 8 34.0 9 42.5 10 46.5 11 52.5 12 76.0 13 90.5 14 85.5 15 103.5 16 149.0 17 194.0 18 233.0 19 286.5 20 332.5 21 397.5 22 516.5 23 632.5 24 775.0 25 963.0 26 1222.0 27 1551.0 28 1889.0 29 2312.0 30 2826.5 31 3419.5 32 4087.5 33 4798.5 34 5651.5 35 6486.5 36 7319.0 37 8195.5 38 9093.0 39 10120.0 40 11012.5 41 11877.0 42 13144.0 43 14361.0 44 15743.0 45 17647.5 46 19822.0 47 22459.0 48 25983.0 49 30124.0 50 34911.0 51 40736.0 52 47460.5 53 55075.0 54 63557.5 55 72645.5 56 82593.0 57 93693.5 58 105954.5 59 119129.0 60 132727.0 61 147064.5 62 161496.0 63 175831.5 64 188767.0 65 199448.5 66 207321.0 67 211782.0 68 212116.5 69 207090.5 70 197367.5 71 183478.0 72 165509.0 73 144908.5 74 123246.5 75 101108.0 76 79786.5 77 60790.5 78 44376.5 79 30644.5 80 20302.5 81 12885.0 82 7746.5 83 4435.0 84 2506.0 85 1490.0 86 952.5 87 641.5 88 452.0 89 334.5 90 266.0 91 203.0 92 160.0 93 128.0 94 103.5 95 85.5 96 60.5 97 44.5 98 37.5 99 21.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.104925 2 0.10532499999999999 3 0.095275 4 0.11080000000000001 5 0.088875 6 0.07725 7 0.0882 8 0.108475 9 0.118225 10-14 0.055444999999999994 15-19 0.05411 20-24 0.03655 25-29 0.034655 30-34 0.05991 35-39 0.015354999999999999 40-44 0.0252 45-49 0.01792 50-54 0.025825 55-59 0.0305 60-64 2.9999999999999997E-5 65-69 2.35E-4 70-74 7.0E-5 75-79 0.00105 80-84 0.00992 85-89 2.4999999999999998E-5 90-94 0.0 95-99 0.012329999999999999 100-101 0.0064624999999999995 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.25287103577175873 #Duplication Level Relative count 1 100.0 2 0.19038457684522736 3 0.009018216797931822 4 0.0010020240886590914 5 0.0 6 0.0 7 0.0010020240886590914 8 0.0 9 0.0 10++ 0.0010020240886590914 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 272430 3.5728571 4.3666277 1 TTTTT 248750 3.365014 3.745863 10-14 GATCG 1273835 3.0808265 4.3139267 1 CGATC 1260190 3.0640924 3.4683807 1 TCGAT 703205 3.0180907 3.4071896 5 ATCGA 706540 3.0136614 3.670774 2 >>END_MODULE