FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_005.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4000000 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 63 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 274435 | 3.6039279 | 4.1970124 | 60-64 |
| TTTTT | 244595 | 3.2882218 | 3.5705283 | 9 |
| GATCG | 1276920 | 3.0905445 | 4.4434786 | 1 |
| CGATC | 1265680 | 3.0758262 | 3.5126166 | 1 |
| ATCGA | 710535 | 3.0307205 | 3.8095562 | 2 |
| TCGAT | 704365 | 3.0185163 | 3.4520237 | 8 |