##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.585774 34.0 31.0 34.0 31.0 34.0 2 32.740549 34.0 31.0 34.0 31.0 34.0 3 32.77086375 34.0 31.0 34.0 31.0 34.0 4 36.15689125 37.0 37.0 37.0 35.0 37.0 5 36.14885025 37.0 37.0 37.0 35.0 37.0 6 36.1538385 37.0 37.0 37.0 35.0 37.0 7 36.1587725 37.0 37.0 37.0 35.0 37.0 8 36.13191525 37.0 37.0 37.0 35.0 37.0 9 37.8839375 39.0 39.0 39.0 35.0 39.0 10-14 38.163419999999995 39.4 39.2 39.4 35.4 39.4 15-19 39.31401095 41.0 40.0 41.0 36.6 41.0 20-24 39.05953625 41.0 39.0 41.0 35.6 41.0 25-29 38.61456295000001 40.2 38.2 41.0 35.0 41.0 30-34 37.855624999999996 39.8 36.8 41.0 33.4 41.0 35-39 36.74470865000001 38.2 35.0 40.6 32.4 41.0 40-44 35.72729145 36.0 35.0 39.6 31.0 41.0 45-49 34.7590915 35.0 34.8 38.0 30.6 40.8 50-54 33.4516171 34.8 33.2 35.4 28.2 39.2 55-59 33.63455075 35.0 34.0 35.0 30.0 37.4 60-64 33.3405316 35.0 34.0 35.0 30.0 35.6 65-69 33.041352950000004 35.0 34.0 35.0 29.0 35.0 70-74 32.76051885 35.0 33.4 35.0 29.0 35.0 75-79 32.4904001 35.0 33.0 35.0 27.6 35.0 80-84 32.17103675 35.0 33.0 35.0 27.0 35.0 85-89 31.8369872 35.0 33.0 35.0 25.8 35.0 90-94 31.4139135 35.0 33.0 35.0 24.0 35.0 95-99 30.777056599999998 35.0 32.2 35.0 21.4 35.0 100-101 29.576935125 34.0 30.0 35.0 9.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7997.0 3 1301.0 4 1754.0 5 2181.0 6 3079.0 7 3728.0 8 4372.0 9 5064.0 10 5354.0 11 5602.0 12 5736.0 13 5778.0 14 5813.0 15 6007.0 16 6485.0 17 7132.0 18 8116.0 19 9200.0 20 10744.0 21 12667.0 22 14952.0 23 18154.0 24 22119.0 25 26531.0 26 31605.0 27 38421.0 28 47300.0 29 57236.0 30 71592.0 31 91312.0 32 120071.0 33 170562.0 34 284932.0 35 697444.0 36 1409901.0 37 650199.0 38 115066.0 39 14425.0 40 68.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.54801886799543 18.733868222148125 16.70873277345955 29.0093801363969 2 32.80248825488981 22.30518798940047 18.86191798638935 26.030405769320375 3 30.29071472892335 19.643741503295725 19.557293369295355 30.508250398485565 4 32.34746818337457 18.276089833232763 18.26346562947812 31.112976353914547 5 32.17618772436213 18.837288469298883 18.72629567368569 30.2602281326533 6 31.374019855190866 17.952017956973744 17.314373187883447 33.359588999951946 7 33.40723946337041 17.813237924507614 17.805628713557763 30.973893898564214 8 30.622542576970563 18.616183668200975 18.68266225846425 32.07861149636421 9 31.514128685561676 17.477802860046452 18.3022036612321 32.70586479315977 10-14 31.693978076498176 18.355498625608234 18.28683033843005 31.66369295946354 15-19 31.768072287950716 18.07016602655288 18.179029744172016 31.982731941324396 20-24 31.72764553843297 18.139439178350617 18.23721956115944 31.89569572205697 25-29 31.837878772416282 18.232512450907237 18.14880937730556 31.780799399370917 30-34 31.960056023264116 18.013776598100645 18.004567842876614 32.02159953575862 35-39 31.8304144868418 18.12121018666602 18.122430951963786 31.92594437452839 40-44 31.971164546703037 18.11018655886674 18.05425861158846 31.864390282841764 45-49 32.05119106084048 17.947701087250366 17.931230855481246 32.069876996427915 50-54 31.897779900427665 18.064538172654913 18.039200109616512 31.99848181730091 55-59 31.98646406312502 18.0964273436049 18.003264235235424 31.913844358034655 60-64 32.06430046108544 17.94769205030745 17.89277699813815 32.09523049046897 65-69 31.920795000000002 18.060415 18.020395 31.998395000000002 70-74 32.027465 18.101025 17.98224 31.889269999999996 75-79 32.084332436546795 17.954366640440597 17.874668392737004 32.08663253027561 80-84 31.935235333102995 18.036787904637272 18.036142806356548 31.991833955903182 85-89 32.056665524664155 18.088289794237546 17.949889489756877 31.90515519134142 90-94 32.12660291787115 17.934600025850187 17.86845454629546 32.0703425099832 95-99 31.992837237922377 17.9996298812905 17.989414364896145 32.01811851589098 100-101 32.20518195394502 18.130450686329244 17.89402769419326 31.77033966553247 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.55739900439232 2 58.832894024210184 3 60.79896512740892 4 63.46044453728912 5 62.436415857015426 6 64.7336088551428 7 64.38113336193462 8 62.70115407333478 9 64.21999347872145 10-14 63.357671035961715 15-19 63.750804229275104 20-24 63.62334126048994 25-29 63.6186781717872 30-34 63.98165555902274 35-39 63.75635886137019 40-44 63.835554829544805 45-49 64.12106805726839 50-54 63.89626171772858 55-59 63.90030842115968 60-64 64.1595309515544 65-69 63.91919 70-74 63.916735 75-79 64.1709649668224 80-84 63.92706928900618 85-89 63.961820716005576 90-94 64.19694542785436 95-99 64.01095575381336 100-101 63.97552161947749 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 65.5 2 28.0 3 24.0 4 22.0 5 18.5 6 22.0 7 27.0 8 33.5 9 35.5 10 37.5 11 46.0 12 62.5 13 78.0 14 92.5 15 123.5 16 155.5 17 194.0 18 231.0 19 281.0 20 369.5 21 461.0 22 547.0 23 656.0 24 810.5 25 983.0 26 1246.0 27 1580.5 28 1924.0 29 2296.5 30 2800.5 31 3449.5 32 4078.5 33 4817.5 34 5640.0 35 6413.5 36 7313.0 37 8218.0 38 9227.0 39 10213.5 40 11128.0 41 12160.5 42 13125.5 43 14411.5 44 15975.5 45 17733.5 46 19914.5 47 22748.0 48 26052.5 49 30056.5 50 35022.0 51 40736.0 52 47693.0 53 55238.0 54 63535.5 55 72857.0 56 82984.5 57 94235.5 58 106076.5 59 118879.0 60 132605.5 61 146881.0 62 161443.0 63 175652.5 64 188657.0 65 199236.0 66 207065.0 67 211218.5 68 211378.5 69 207097.0 70 197607.5 71 183597.5 72 165780.5 73 145777.5 74 123596.0 75 100999.5 76 79762.0 77 60335.5 78 43952.0 79 30545.0 80 20258.5 81 12786.0 82 7596.5 83 4210.5 84 2331.5 85 1375.0 86 852.5 87 549.0 88 388.5 89 299.0 90 229.5 91 188.0 92 146.5 93 105.5 94 78.5 95 64.0 96 45.0 97 28.5 98 20.5 99 14.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.206675 2 0.20315 3 0.200275 4 0.19172499999999998 5 0.196225 6 0.1168 7 0.12105 8 0.155825 9 0.17295 10-14 0.099445 15-19 0.09068 20-24 0.05664 25-29 0.051460000000000006 30-34 0.09507499999999999 35-39 0.06269 40-44 0.03209 45-49 0.031765 50-54 0.051555000000000004 55-59 0.040905 60-64 9.5E-5 65-69 0.0 70-74 0.0 75-79 0.0040750000000000005 80-84 0.015234999999999999 85-89 2.2E-4 90-94 7.25E-4 95-99 0.0050550000000000005 100-101 0.009725000000000001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.24086030102540973 #Duplication Level Relative count 1 100.0 2 0.16930983700171315 3 0.008515583517837643 4 0.002003666710079445 5 0.0010018333550397226 6 0.0010018333550397226 7 5.009166775198613E-4 8 0.0 9 0.0 10++ 0.0010018333550397226 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 274435 3.6039279 4.1970124 60-64 TTTTT 244595 3.2882218 3.5705283 9 GATCG 1276920 3.0905445 4.4434786 1 CGATC 1265680 3.0758262 3.5126166 1 ATCGA 710535 3.0307205 3.8095562 2 TCGAT 704365 3.0185163 3.4520237 8 >>END_MODULE