Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_004.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 244495 | 3.2381332 | 4.016534 | 1 |
TTTTT | 234330 | 3.1832712 | 3.5678463 | 10-14 |
GATCG | 1275575 | 3.08947 | 4.369523 | 1 |
CGATC | 1267055 | 3.0810082 | 3.5211368 | 6 |
ATCGA | 712485 | 3.049373 | 3.7610085 | 2 |
TCGAT | 706250 | 3.0380676 | 3.7077904 | 5 |