##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.6246335 34.0 31.0 34.0 31.0 34.0 2 32.772449 34.0 31.0 34.0 31.0 34.0 3 32.8191345 34.0 31.0 34.0 31.0 34.0 4 36.209696 37.0 37.0 37.0 35.0 37.0 5 36.21813325 37.0 37.0 37.0 35.0 37.0 6 36.20292475 37.0 37.0 37.0 35.0 37.0 7 36.18802525 37.0 37.0 37.0 35.0 37.0 8 36.15157875 37.0 37.0 37.0 35.0 37.0 9 37.926148 39.0 39.0 39.0 37.0 39.0 10-14 38.21099145 39.4 39.2 39.4 35.8 39.4 15-19 39.36856465 41.0 40.0 41.0 36.8 41.0 20-24 39.15958859999999 41.0 39.0 41.0 35.8 41.0 25-29 38.713820049999995 40.4 38.4 41.0 35.0 41.0 30-34 37.96199765 40.0 36.8 41.0 33.6 41.0 35-39 36.890387450000006 38.4 35.0 40.6 32.6 41.0 40-44 35.878814600000005 36.0 35.0 39.8 31.8 41.0 45-49 34.903353599999996 35.0 35.0 38.0 31.0 40.8 50-54 33.590494500000005 34.8 33.2 35.4 28.8 39.2 55-59 33.836517949999994 35.0 35.0 35.0 31.0 37.4 60-64 33.518386150000005 35.0 34.4 35.0 30.4 35.6 65-69 33.2332671 35.0 34.0 35.0 30.0 35.0 70-74 32.99829815 35.0 34.0 35.0 29.0 35.0 75-79 32.76584665 35.0 33.4 35.0 29.0 35.0 80-84 32.477690949999996 35.0 33.0 35.0 27.6 35.0 85-89 32.16657024999999 35.0 33.0 35.0 27.0 35.0 90-94 31.78948375 35.0 33.0 35.0 25.8 35.0 95-99 31.25889545 35.0 33.0 35.0 24.0 35.0 100-101 30.154013374999998 34.0 31.5 35.0 19.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6655.0 3 1003.0 4 1387.0 5 1795.0 6 2253.0 7 2970.0 8 3692.0 9 4078.0 10 4549.0 11 4699.0 12 4736.0 13 4867.0 14 5023.0 15 5349.0 16 5735.0 17 6204.0 18 6939.0 19 7830.0 20 9105.0 21 10943.0 22 13456.0 23 16049.0 24 19772.0 25 24088.0 26 29151.0 27 35829.0 28 43618.0 29 53850.0 30 67897.0 31 86344.0 32 115034.0 33 163007.0 34 272547.0 35 693322.0 36 1465239.0 37 669408.0 38 116615.0 39 14889.0 40 73.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.64690838216776 18.60502194702129 16.727417169611417 29.020652501199535 2 32.83652208431458 22.29155565211232 18.85285558425839 26.01906667931471 3 30.33294188434134 19.564966016020374 19.51193018392096 30.590161915717328 4 32.36424151802751 18.22273662873266 18.227741665050456 31.185280188189367 5 32.27480847273583 18.75053167267978 18.749555896938066 30.225103957646326 6 31.397507591191285 17.912157695531842 17.23284901395237 33.457485699324494 7 33.4514335645514 17.777802814926645 17.780056158324914 30.990707462197037 8 30.704429610890553 18.554145950481534 18.616789189595362 32.12463524903255 9 31.54156708489965 17.444696580482567 18.255695667933246 32.758040666684536 10-14 31.735862836426175 18.312949360074608 18.260953106448234 31.690234697050983 15-19 31.810547302409514 18.03051798710663 18.17562293016483 31.983311780319024 20-24 31.76841884792234 18.10078661850411 18.17739052083999 31.95340401273356 25-29 31.90766027363592 18.178524878660543 18.097240789191705 31.816574058511836 30-34 31.9865908701294 17.981152639593972 17.98350011324433 32.0487563770323 35-39 31.87328635313129 18.090321636718773 18.07175285496896 31.964639155180976 40-44 32.01971044696415 18.077630559847996 17.998928255828165 31.90373073735969 45-49 32.0633546033044 17.936337754888115 17.89617924382244 32.10412839798505 50-54 31.91219165824956 18.031461930699617 18.024347333246745 32.03199907780408 55-59 32.02536898465279 18.064287938726224 17.98062682053482 31.929716256086166 60-64 32.09331383982456 17.92481632334691 17.867925811332302 32.113944025496224 65-69 31.952229999999997 18.019785 17.995855 32.032129999999995 70-74 32.044824999999996 18.0589 17.95391 31.942365 75-79 32.092150745995255 17.92226402937704 17.855033417024877 32.13055180760283 80-84 31.955252387994687 18.018240733470336 17.999160782222987 32.027346096311994 85-89 32.05499363969471 18.06239199481575 17.94065115125526 31.94196321423428 90-94 32.1221116864571 17.87902333851345 17.84630261865761 32.15256235637184 95-99 31.98120849165802 17.980276448208272 17.97632541619871 32.062189643935 100-101 32.20639944246779 18.094890750969324 17.873075653064234 31.82563415349865 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.66756088336729 2 58.8555887636293 3 60.92310380005866 4 63.54952170621688 5 62.49991243038215 6 64.85499329051578 7 64.44214102674843 8 62.8290648599231 9 64.29960775158419 10-14 63.426097533477154 15-19 63.79385908272853 20-24 63.7218228606559 25-29 63.72423433214776 30-34 64.0353472471617 35-39 63.83792550831227 40-44 63.923441184323835 45-49 64.16748300128945 50-54 63.94419073605364 55-59 63.95508524073896 60-64 64.20725786532078 65-69 63.984359999999995 70-74 63.987190000000005 75-79 64.22270255359808 80-84 63.98259848430668 85-89 63.996956853928985 90-94 64.27467404282893 95-99 64.04339813559302 100-101 64.03203359596644 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 7.0 2 4.5 3 5.5 4 5.0 5 7.0 6 9.5 7 13.0 8 22.5 9 37.0 10 47.5 11 63.0 12 82.0 13 107.0 14 157.5 15 186.0 16 205.0 17 267.0 18 317.0 19 343.0 20 400.5 21 457.0 22 527.5 23 645.5 24 783.5 25 992.0 26 1224.5 27 1525.5 28 1887.0 29 2283.5 30 2831.5 31 3360.0 32 3963.5 33 4752.5 34 5494.5 35 6256.0 36 7061.5 37 7985.0 38 9027.5 39 9931.0 40 10860.5 41 11819.0 42 12844.0 43 14114.5 44 15607.0 45 17474.0 46 19585.5 47 22152.0 48 25442.5 49 29739.0 50 34607.0 51 40179.5 52 46739.5 53 54405.5 54 62922.5 55 71963.5 56 82468.5 57 93872.0 58 105904.0 59 118344.5 60 131597.0 61 146112.0 62 161113.0 63 175412.0 64 188631.0 65 199505.5 66 207922.0 67 213097.5 68 212993.0 69 208138.5 70 198633.5 71 184981.5 72 167395.0 73 146633.5 74 124522.5 75 102401.5 76 80988.5 77 61357.5 78 44391.5 79 30575.0 80 20070.0 81 12459.0 82 7269.0 83 4032.5 84 2158.0 85 1129.5 86 638.5 87 393.0 88 277.0 89 217.5 90 152.0 91 110.5 92 90.5 93 72.0 94 65.0 95 45.5 96 27.5 97 24.5 98 21.0 99 12.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.117425 2 0.116325 3 0.1147 4 0.10062499999999999 5 0.0795 6 0.122725 7 0.148375 8 0.18875 9 0.197175 10-14 0.12742 15-19 0.10678 20-24 0.070365 25-29 0.072695 30-34 0.105375 35-39 0.07422000000000001 40-44 0.060105 45-49 0.046095000000000004 50-54 0.06462 55-59 0.055125 60-64 9.0E-4 65-69 0.0 70-74 0.0 75-79 0.015785 80-84 0.02595 85-89 0.0048000000000000004 90-94 0.0022 95-99 0.02612 100-101 0.0237125 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.315098249731597 #Duplication Level Relative count 1 100.0 2 0.1783352703081794 3 0.00400753416422875 4 0.002504708852642969 5 5.009417705285937E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0030056506231715624 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 244495 3.2381332 4.016534 1 TTTTT 234330 3.1832712 3.5678463 10-14 GATCG 1275575 3.08947 4.369523 1 CGATC 1267055 3.0810082 3.5211368 6 ATCGA 712485 3.049373 3.7610085 2 TCGAT 706250 3.0380676 3.7077904 5 >>END_MODULE