Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_003.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 249040 | 3.300557 | 4.041061 | 60-64 |
TTTTT | 239045 | 3.2372053 | 3.6830244 | 10-14 |
GATCG | 1281640 | 3.1050146 | 4.350651 | 1 |
CGATC | 1269140 | 3.085232 | 3.4997208 | 1 |
ATCGA | 711015 | 3.0429976 | 3.6794953 | 2 |
TCGAT | 705360 | 3.0318532 | 3.2906044 | 8 |