##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61042275 34.0 31.0 34.0 31.0 34.0 2 32.76761325 34.0 31.0 34.0 31.0 34.0 3 32.81248575 34.0 31.0 34.0 31.0 34.0 4 36.20297025 37.0 37.0 37.0 35.0 37.0 5 36.21957375 37.0 37.0 37.0 35.0 37.0 6 36.1689035 37.0 37.0 37.0 35.0 37.0 7 36.1687965 37.0 37.0 37.0 35.0 37.0 8 36.1321175 37.0 37.0 37.0 35.0 37.0 9 37.88545975 39.0 39.0 39.0 35.0 39.0 10-14 38.173299 39.4 39.0 39.4 35.4 39.4 15-19 39.33131515 41.0 39.8 41.0 36.6 41.0 20-24 39.09446935 41.0 39.0 41.0 35.6 41.0 25-29 38.6415305 40.2 38.2 41.0 35.0 41.0 30-34 37.871479699999995 39.8 36.8 41.0 33.4 41.0 35-39 36.796383500000005 38.2 35.0 40.6 32.6 41.0 40-44 35.768980600000006 36.0 35.0 39.6 31.4 41.0 45-49 34.7874628 35.0 34.8 38.0 30.6 40.6 50-54 33.46650115 34.8 33.2 35.2 28.2 39.2 55-59 33.72320345 35.0 34.8 35.0 30.4 37.4 60-64 33.3918984 35.0 34.0 35.0 30.0 35.6 65-69 33.085805500000006 35.0 34.0 35.0 29.2 35.0 70-74 32.816982949999996 35.0 33.2 35.0 29.0 35.0 75-79 32.5621664 35.0 33.0 35.0 28.0 35.0 80-84 32.23906905 35.0 33.0 35.0 27.0 35.0 85-89 31.88758625 35.0 33.0 35.0 26.2 35.0 90-94 31.445432400000005 35.0 33.0 35.0 24.0 35.0 95-99 30.822859599999997 35.0 32.2 35.0 21.8 35.0 100-101 29.610009124999998 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7079.0 3 1178.0 4 1666.0 5 2089.0 6 2796.0 7 3545.0 8 4067.0 9 4692.0 10 4971.0 11 5201.0 12 5408.0 13 5396.0 14 5675.0 15 5645.0 16 6179.0 17 6791.0 18 7812.0 19 8808.0 20 10394.0 21 12330.0 22 14748.0 23 17753.0 24 21531.0 25 26074.0 26 31007.0 27 37962.0 28 46462.0 29 57016.0 30 71150.0 31 91255.0 32 120986.0 33 172103.0 34 285525.0 35 707986.0 36 1419868.0 37 640324.0 38 112374.0 39 14090.0 40 64.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.60394123295448 18.684284831730118 16.69574546696131 29.016028468354087 2 32.89234086924144 22.268034168700012 18.833748009716015 26.00587695234254 3 30.292412935883522 19.581964141047948 19.5453856280971 30.58023729497143 4 32.41260070005001 18.18233673401227 18.242604780464447 31.162457785473276 5 32.2317347556849 18.7970624593909 18.680823798352193 30.29037898657201 6 31.380040261484265 17.951372662161667 17.253633826859588 33.41495324949448 7 33.424833762531215 17.799050229051648 17.777834553297307 30.99828145511983 8 30.69554285559642 18.545938484075254 18.611089324558687 32.14742933576964 9 31.55728803827895 17.41423195979718 18.25013733858489 32.778342663338975 10-14 31.731770607121817 18.325057272218732 18.27026959910974 31.672902521549712 15-19 31.821505693745834 18.051279571976732 18.151796153333933 31.975418580943497 20-24 31.73569025296068 18.104677717146124 18.21287890369609 31.946753126197102 25-29 31.86591492892864 18.198763631734707 18.116131591598972 31.819189847737682 30-34 31.994231063506508 18.003664051553613 17.973279624478515 32.02882526046136 35-39 31.855334106758836 18.089605982785002 18.089816125566514 31.96524378488964 40-44 31.997736955099 18.094153593892003 17.992747810570595 31.915361640438405 45-49 32.07884440432682 17.910455302238017 17.892146244747277 32.11855404868788 50-54 31.903747905902218 18.042634384762803 18.037750950243307 32.01586675909167 55-59 32.01486203591038 18.05449353123362 17.987634784521394 31.943009648334602 60-64 32.0906043015128 17.937268475821337 17.87843789045701 32.09368933220886 65-69 31.922258095048427 18.032109343347614 18.003339304508064 32.0422932570959 70-74 32.03236101618051 18.063669031834518 17.95678897839449 31.947180973590488 75-79 32.0893807233885 17.906238692241544 17.87870501924957 32.12567556512039 80-84 31.939405125250214 18.01459326816981 17.993015478587772 32.052986127992206 85-89 32.08275202323914 18.048547138944304 17.930068383167747 31.938632454648815 90-94 32.13849599598073 17.90587477163355 17.82742841451157 32.128200817874145 95-99 32.01333348272362 17.992543757680426 17.955049464856003 32.03907329473996 100-101 32.23398506724093 18.099812784140138 17.84003108678469 31.826171061834245 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.61996970130856 2 58.89821782158398 3 60.87265023085495 4 63.575058485523286 5 62.5221137422569 6 64.79499351097874 7 64.42311521765104 8 62.842972191366066 9 64.33563070161793 10-14 63.40467312867153 15-19 63.79692427468934 20-24 63.68244337915778 25-29 63.68510477666632 30-34 64.02305632396788 35-39 63.820577891648476 40-44 63.91309859553741 45-49 64.19739845301471 50-54 63.919614664993894 55-59 63.957871684244985 60-64 64.18429363372165 65-69 63.964551352144326 70-74 63.97954198977099 75-79 64.21505628850889 80-84 63.99239125324242 85-89 64.02138447788795 90-94 64.26669681385488 95-99 64.05240677746356 100-101 64.06015612907517 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 5.0 2 6.5 3 8.0 4 7.0 5 7.5 6 11.5 7 19.0 8 28.5 9 34.5 10 43.5 11 69.5 12 93.5 13 112.0 14 147.5 15 175.0 16 217.5 17 275.5 18 309.0 19 345.0 20 401.0 21 459.5 22 522.5 23 619.5 24 789.5 25 1009.0 26 1259.0 27 1585.0 28 1913.5 29 2299.5 30 2714.0 31 3266.0 32 4005.0 33 4759.0 34 5473.5 35 6171.0 36 7057.5 37 8000.0 38 8968.5 39 9963.5 40 10866.5 41 11925.0 42 13080.5 43 14207.0 44 15652.5 45 17342.5 46 19483.5 47 22377.0 48 25794.5 49 29880.5 50 34685.5 51 40355.5 52 46981.0 53 54685.5 54 63309.0 55 72708.5 56 82819.5 57 93357.5 58 105431.5 59 118891.0 60 132573.0 61 146607.0 62 160998.0 63 174938.5 64 188056.0 65 199640.5 66 208010.0 67 212630.5 68 212957.0 69 208117.0 70 198540.5 71 184178.0 72 166030.5 73 145765.0 74 124053.0 75 101866.0 76 80210.0 77 61041.5 78 44714.5 79 30896.0 80 20248.0 81 12633.0 82 7528.5 83 4276.5 84 2362.0 85 1347.0 86 781.5 87 482.5 88 350.5 89 286.5 90 220.5 91 162.0 92 131.0 93 105.5 94 80.5 95 58.0 96 48.0 97 40.0 98 21.0 99 15.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12769999999999998 2 0.092775 3 0.07795 4 0.071425 5 0.076275 6 0.17754999999999999 7 0.19172499999999998 8 0.231525 9 0.20102499999999998 10-14 0.132645 15-19 0.09608499999999999 20-24 0.084275 25-29 0.07508000000000001 30-34 0.113305 35-39 0.06794499999999999 40-44 0.055009999999999996 45-49 0.04947000000000001 50-54 0.07033 55-59 0.07291 60-64 9.95E-4 65-69 1.35E-4 70-74 4.9999999999999996E-5 75-79 0.01334 80-84 0.0361 85-89 0.0031699999999999996 90-94 0.00173 95-99 0.03812 100-101 0.021825 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2787616587817436 #Duplication Level Relative count 1 100.0 2 0.18285382214585222 3 0.00601163250890473 4 0.0010019387514841219 5 5.009693757420609E-4 6 0.0010019387514841219 7 0.0 8 0.0 9 0.0 10++ 0.0025048468787103044 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 249040 3.300557 4.041061 60-64 TTTTT 239045 3.2372053 3.6830244 10-14 GATCG 1281640 3.1050146 4.350651 1 CGATC 1269140 3.085232 3.4997208 1 ATCGA 711015 3.0429976 3.6794953 2 TCGAT 705360 3.0318532 3.2906044 8 >>END_MODULE