Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_002.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 251480 | 3.3294568 | 4.0218945 | 60-64 |
TTTTT | 237660 | 3.2200136 | 3.6635382 | 10-14 |
GATCG | 1273730 | 3.0852094 | 4.2496743 | 1 |
CGATC | 1259910 | 3.0626612 | 3.5182467 | 6 |
ATCGA | 710390 | 3.0393298 | 3.5978444 | 2 |
TCGAT | 703720 | 3.0247345 | 3.3047986 | 5 |