##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_002.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62996475 34.0 31.0 34.0 31.0 34.0 2 32.803682 34.0 31.0 34.0 31.0 34.0 3 32.8327165 34.0 31.0 34.0 31.0 34.0 4 36.233227 37.0 37.0 37.0 35.0 37.0 5 36.222911 37.0 37.0 37.0 35.0 37.0 6 36.1949415 37.0 37.0 37.0 35.0 37.0 7 36.196237 37.0 37.0 37.0 35.0 37.0 8 36.16272125 37.0 37.0 37.0 35.0 37.0 9 37.93249525 39.0 39.0 39.0 37.0 39.0 10-14 38.22059735 39.4 39.2 39.4 35.8 39.4 15-19 39.36304695 41.0 40.0 41.0 36.8 41.0 20-24 39.1277785 41.0 39.0 41.0 35.8 41.0 25-29 38.67353005 40.2 38.4 41.0 35.0 41.0 30-34 37.9079858 39.8 36.8 41.0 33.4 41.0 35-39 36.8148783 38.4 35.0 40.6 32.6 41.0 40-44 35.7766625 36.0 35.0 39.8 31.4 41.0 45-49 34.77433189999999 35.0 34.8 38.0 30.6 40.6 50-54 33.43441325 34.8 33.2 35.2 28.2 39.2 55-59 33.704228750000006 35.0 34.6 35.0 30.0 37.6 60-64 33.36702565 35.0 34.0 35.0 30.0 35.6 65-69 33.030666499999995 35.0 34.0 35.0 29.0 35.0 70-74 32.749833200000005 35.0 33.2 35.0 29.0 35.0 75-79 32.45317635 35.0 33.0 35.0 27.2 35.0 80-84 32.118874749999996 35.0 33.0 35.0 27.0 35.0 85-89 31.7630047 35.0 33.0 35.0 25.2 35.0 90-94 31.30433855 35.0 33.0 35.0 24.0 35.0 95-99 30.649494850000004 35.0 31.8 35.0 20.2 35.0 100-101 29.431096375 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6880.0 3 1151.0 4 1611.0 5 2175.0 6 2726.0 7 3514.0 8 4149.0 9 4821.0 10 5123.0 11 5379.0 12 5497.0 13 5754.0 14 5784.0 15 6241.0 16 6517.0 17 7280.0 18 8268.0 19 9287.0 20 10954.0 21 12756.0 22 14933.0 23 18274.0 24 22104.0 25 26516.0 26 31524.0 27 38775.0 28 46851.0 29 57232.0 30 72136.0 31 92600.0 32 122786.0 33 174416.0 34 289608.0 35 702411.0 36 1403041.0 37 642634.0 38 113889.0 39 14340.0 40 63.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.565602295790576 18.722719899981 16.6923481908983 29.019329613330125 2 32.79203432080988 22.2726650505275 18.893788024503852 26.04151260415877 3 30.28578506440861 19.60581629282647 19.538079652483763 30.57031899028115 4 32.38694336121729 18.232702045285208 18.23840660608156 31.14194798741594 5 32.20276635154796 18.81916316789643 18.733906449331684 30.24416403122393 6 31.334880550587645 17.92988241115479 17.27445193401322 33.460785104244344 7 33.38198027707469 17.794612887374353 17.82987712117622 30.993529714374734 8 30.655905049267716 18.569601687389543 18.64527870359585 32.12921455974689 9 31.53492968632017 17.454362037750574 18.26064460029357 32.75006367563569 10-14 31.695843218079332 18.326275285539445 18.294618067731328 31.683263428649894 15-19 31.804542378017626 18.042321322719726 18.166674823127398 31.986461476135247 20-24 31.729441316862903 18.10479850169628 18.21818900328288 31.947571178157936 25-29 31.869037665675048 18.21753505473466 18.118862116200816 31.794565163389464 30-34 31.97528122538607 18.00751389166044 17.985071216703798 32.0321336662497 35-39 31.851753942767246 18.101796405088592 18.095457699798416 31.950991952345742 40-44 31.98851585585352 18.09339476125215 18.020705935507088 31.89738344738724 45-49 32.07824969385489 17.912483792354656 17.90910232767323 32.10016418611722 50-54 31.90479597099815 18.025275813231932 18.045541888642145 32.02438632712777 55-59 32.01332452330111 18.0679110987293 18.00489795362885 31.913866424340746 60-64 32.079175098968875 17.93414241767802 17.87666234582793 32.11002013752517 65-69 31.93201 18.023915 18.017865 32.02621 70-74 32.05323 18.06515 17.94704 31.93458 75-79 32.1005689547118 17.91847054348354 17.859969403788927 32.120991098015736 80-84 31.961036577836094 18.0096168672844 17.972600445867574 32.05674610901193 85-89 32.05856876312633 18.059201967052196 17.941291236005664 31.940938033815808 90-94 32.15147321514732 17.90881679088168 17.81353678135368 32.12617321261732 95-99 32.009240716770734 17.982366815843857 17.956409184300185 32.05198328308523 100-101 32.25851581189112 18.09527667402557 17.84050307596174 31.805704438121573 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.5849319091207 2 58.83354692496865 3 60.856104054689766 4 63.52889134863323 5 62.44693038277188 6 64.79566565483199 7 64.37550999144942 8 62.78511960901461 9 64.28499336195586 10-14 63.37910664672922 15-19 63.79100385415287 20-24 63.67701249502083 25-29 63.663602829064516 30-34 64.00741489163576 35-39 63.80274589511299 40-44 63.88589930324077 45-49 64.17841387997211 50-54 63.92918229812593 55-59 63.927190947641854 60-64 64.18919523649404 65-69 63.95822 70-74 63.98781 75-79 64.22156005272754 80-84 64.01778268684802 85-89 63.99950679694214 90-94 64.27764642776465 95-99 64.06122399985595 100-101 64.0642202500127 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8.0 1 6.5 2 6.5 3 8.5 4 6.5 5 6.5 6 12.5 7 20.5 8 24.0 9 28.0 10 38.5 11 45.0 12 54.5 13 81.0 14 121.0 15 153.0 16 192.0 17 232.5 18 275.0 19 322.0 20 393.5 21 478.5 22 554.5 23 621.0 24 761.5 25 971.0 26 1190.5 27 1493.0 28 1857.0 29 2319.5 30 2777.5 31 3326.0 32 4057.0 33 4746.5 34 5516.0 35 6311.0 36 7142.5 37 8075.5 38 8967.0 39 9922.5 40 10916.0 41 12037.5 42 13256.0 43 14380.0 44 15759.5 45 17539.0 46 19650.0 47 22417.5 48 25787.5 49 29832.0 50 34884.0 51 40747.5 52 47142.5 53 54651.5 54 63381.0 55 72432.0 56 82381.5 57 93718.5 58 106018.5 59 118754.0 60 132483.5 61 147211.0 62 161722.0 63 175202.5 64 188115.0 65 199242.5 66 207729.5 67 212653.5 68 212596.5 69 207354.0 70 197824.5 71 183804.0 72 165725.5 73 145434.5 74 123296.5 75 101012.5 76 80107.0 77 61182.5 78 44431.5 79 30954.0 80 20612.5 81 12845.0 82 7653.0 83 4482.0 84 2551.5 85 1490.5 86 949.0 87 618.5 88 450.0 89 337.5 90 247.5 91 216.0 92 166.5 93 128.5 94 98.5 95 74.5 96 63.5 97 50.0 98 35.0 99 23.5 100 13.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.138975 2 0.101425 3 0.091 4 0.07995 5 0.09585 6 0.16485 7 0.18215 8 0.20087500000000003 9 0.177675 10-14 0.117565 15-19 0.07921 20-24 0.070995 25-29 0.06378500000000001 30-34 0.10103499999999999 35-39 0.058455 40-44 0.046535 45-49 0.043315 50-54 0.05465 55-59 0.06847 60-64 1.25E-4 65-69 0.0 70-74 0.0 75-79 0.010495 80-84 0.030855 85-89 6.2E-4 90-94 9.999999999999999E-6 95-99 0.0294 100-101 0.019075 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.23188174031244124 #Duplication Level Relative count 1 100.0 2 0.16930644466484338 3 0.0075135996153037 4 0.0015027199230607398 5 0.0 6 5.009066410202466E-4 7 0.0010018132820404932 8 0.0 9 5.009066410202466E-4 10++ 0.0010018132820404932 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 251480 3.3294568 4.0218945 60-64 TTTTT 237660 3.2200136 3.6635382 10-14 GATCG 1273730 3.0852094 4.2496743 1 CGATC 1259910 3.0626612 3.5182467 6 ATCGA 710390 3.0393298 3.5978444 2 TCGAT 703720 3.0247345 3.3047986 5 >>END_MODULE