Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 247140 | 3.2631094 | 3.8114133 | 60-64 |
TTTTT | 241730 | 3.260375 | 3.693029 | 10-14 |
GATCG | 1278535 | 3.0951788 | 4.3655705 | 1 |
CGATC | 1266550 | 3.078987 | 3.4239419 | 1 |
ATCGA | 712055 | 3.0428405 | 3.7392218 | 2 |
TCGAT | 704495 | 3.0233836 | 3.3033895 | 5 |