##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.623695 34.0 31.0 34.0 31.0 34.0 2 32.772367 34.0 31.0 34.0 31.0 34.0 3 32.81342675 34.0 31.0 34.0 31.0 34.0 4 36.183854 37.0 37.0 37.0 35.0 37.0 5 36.19117 37.0 37.0 37.0 35.0 37.0 6 36.176735 37.0 37.0 37.0 35.0 37.0 7 36.18192425 37.0 37.0 37.0 35.0 37.0 8 36.166885 37.0 37.0 37.0 35.0 37.0 9 37.940576 39.0 39.0 39.0 37.0 39.0 10-14 38.217966000000004 39.4 39.2 39.4 35.8 39.4 15-19 39.38928835 41.0 40.0 41.0 37.0 41.0 20-24 39.1599611 41.0 39.2 41.0 35.8 41.0 25-29 38.715709950000004 40.4 38.4 41.0 35.0 41.0 30-34 37.96448225 40.0 36.8 41.0 33.6 41.0 35-39 36.8848945 38.4 35.0 40.6 32.6 41.0 40-44 35.83519895 36.0 35.0 39.8 31.6 41.0 45-49 34.8532666 35.0 34.8 38.0 30.8 40.8 50-54 33.5052617 34.8 33.2 35.4 28.4 39.2 55-59 33.77393744999999 35.0 35.0 35.0 31.0 37.6 60-64 33.46620645 35.0 34.4 35.0 30.0 35.6 65-69 33.15759955 35.0 34.0 35.0 29.6 35.0 70-74 32.90081915 35.0 33.8 35.0 29.0 35.0 75-79 32.6193392 35.0 33.0 35.0 28.2 35.0 80-84 32.285933150000005 35.0 33.0 35.0 27.0 35.0 85-89 31.954451849999998 35.0 33.0 35.0 26.6 35.0 90-94 31.5471343 35.0 33.0 35.0 24.4 35.0 95-99 30.9402646 35.0 32.6 35.0 22.2 35.0 100-101 29.83139825 34.0 30.5 35.0 10.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6960.0 3 1001.0 4 1435.0 5 1820.0 6 2568.0 7 3185.0 8 3889.0 9 4448.0 10 4710.0 11 4926.0 12 5312.0 13 5222.0 14 5390.0 15 5598.0 16 5974.0 17 6580.0 18 7660.0 19 8701.0 20 10007.0 21 12111.0 22 14369.0 23 17117.0 24 20619.0 25 25320.0 26 30652.0 27 37333.0 28 45282.0 29 56145.0 30 70403.0 31 90322.0 32 119454.0 33 168941.0 34 279041.0 35 684837.0 36 1426546.0 37 671990.0 38 118676.0 39 15386.0 40 70.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.55356241380045 18.720043893658094 16.7031403256699 29.02325336687156 2 32.80297804488408 22.327146105442868 18.861451882042413 26.008423967630645 3 30.288780398859483 19.609956860018475 19.54816730217824 30.5530954389438 4 32.348238110800985 18.25352521841265 18.25505288610236 31.143183784684002 5 32.224114042179735 18.792033718142537 18.775403067854054 30.20844917182367 6 31.385497876909856 17.914142815501013 17.269302390342066 33.43105691724706 7 33.39600080350617 17.771237184101597 17.851637895234617 30.98112411715761 8 30.631883509180014 18.581846531664297 18.686330240144734 32.09993971901095 9 31.529574934278067 17.42279347220946 18.3138369314586 32.733794662053874 10-14 31.70857155359556 18.33600548572701 18.286609509992022 31.668813450685406 15-19 31.799064067620797 18.061258762635994 18.180899113880646 31.95877805586256 20-24 31.725511774233567 18.112394966865587 18.24030631475468 31.921786944146163 25-29 31.86124990394344 18.21323895509676 18.12100464753647 31.80450649342333 30-34 31.959294037048704 18.011852068661558 18.015010231245572 32.01384366304417 35-39 31.8442018752153 18.097341180961855 18.114357662832997 31.944099280989846 40-44 31.966156073192803 18.111720637573484 18.036555379061024 31.88556791017269 45-49 32.063756905325604 17.938884366711008 17.91668367485781 32.08067505310557 50-54 31.9046079308041 18.039241835280777 18.050752007952372 32.00539822596275 55-59 31.986936730567965 18.09374799226387 18.015420013894285 31.903895263273874 60-64 32.06728508410636 17.9513774392218 17.88182235227794 32.0995151243939 65-69 31.90773 18.065034999999998 18.022270000000002 32.004965 70-74 32.01702221446888 18.095715381358072 17.97939028248174 31.907872121691305 75-79 32.0963280398118 17.931928578590327 17.88813719599632 32.08360618560155 80-84 31.948220297156972 18.02812762140985 18.020090215010374 32.00356186642281 85-89 32.06435890892276 18.08418180407266 17.92213602625293 31.92932326075165 90-94 32.140527634893154 17.930281192772366 17.842709550804077 32.0864816215304 95-99 32.00014222892225 18.004026118711238 17.97813085290894 32.01770079945757 100-101 32.2182738527713 18.081449975273035 17.890897326337445 31.809378845618223 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.57681578067202 2 58.811402012514726 3 60.841875837803286 4 63.49142189548499 5 62.43256321400341 6 64.81655479415693 7 64.37712492066379 8 62.73182322819096 9 64.26336959633194 10-14 63.377385004280974 15-19 63.75784212348336 20-24 63.64729871837973 25-29 63.66575639736677 30-34 63.97313770009288 35-39 63.78830115620515 40-44 63.851723983365495 45-49 64.14443195843118 50-54 63.910006156766855 55-59 63.89083199384184 60-64 64.16680020850026 65-69 63.912695 70-74 63.924894336160186 75-79 64.17993422541335 80-84 63.95178216357977 85-89 63.993682169674415 90-94 64.22700925642356 95-99 64.01784302837981 100-101 64.02765269838953 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 5.5 2 4.5 3 3.0 4 5.5 5 8.5 6 6.5 7 12.0 8 22.5 9 27.5 10 33.5 11 55.5 12 84.0 13 108.5 14 135.5 15 164.5 16 201.5 17 241.0 18 284.5 19 332.5 20 372.0 21 437.0 22 541.0 23 641.5 24 790.5 25 1028.0 26 1286.0 27 1535.5 28 1864.0 29 2275.0 30 2754.5 31 3396.5 32 4095.5 33 4777.5 34 5565.5 35 6507.0 36 7342.0 37 8145.0 38 9093.5 39 10069.0 40 11021.0 41 12037.0 42 13197.0 43 14464.5 44 15953.0 45 17613.0 46 19611.5 47 22248.0 48 25830.0 49 30160.0 50 35052.0 51 40668.0 52 47362.0 53 54891.0 54 63346.0 55 72825.0 56 82903.0 57 93988.5 58 106033.5 59 118770.0 60 132368.0 61 146944.5 62 161513.5 63 175722.5 64 188888.5 65 199568.0 66 207584.5 67 212558.5 68 212385.5 69 207422.0 70 197989.5 71 183884.5 72 166138.0 73 145345.5 74 123249.5 75 101134.0 76 79730.5 77 60482.5 78 43878.0 79 30376.0 80 20126.5 81 12455.5 82 7386.5 83 4188.0 84 2322.0 85 1319.0 86 789.5 87 521.0 88 368.0 89 263.5 90 196.0 91 167.5 92 136.0 93 107.0 94 84.5 95 55.0 96 37.0 97 32.5 98 26.0 99 13.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.21337499999999998 2 0.18955 3 0.1854 4 0.174625 5 0.1843 6 0.1691 7 0.18745 8 0.175825 9 0.17602500000000001 10-14 0.13356500000000002 15-19 0.096415 20-24 0.07141499999999999 25-29 0.05888 30-34 0.10013999999999999 35-39 0.06747500000000001 40-44 0.05356 45-49 0.04816 50-54 0.044939999999999994 55-59 0.07402 60-64 1.25E-4 65-69 0.0 70-74 8.5E-5 75-79 0.014575 80-84 0.02994 85-89 4.7999999999999996E-4 90-94 0.001875 95-99 0.020335000000000002 100-101 0.007949999999999999 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.31718598587398883 #Duplication Level Relative count 1 100.0 2 0.20043795693590497 3 0.007516423385096436 4 0.0020043795693590496 5 0.0010021897846795248 6 0.0015032846770192871 7 5.010948923397624E-4 8 0.0 9 5.010948923397624E-4 10++ 0.005512043815737386 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 247140 3.2631094 3.8114133 60-64 TTTTT 241730 3.260375 3.693029 10-14 GATCG 1278535 3.0951788 4.3655705 1 CGATC 1266550 3.078987 3.4239419 1 ATCGA 712055 3.0428405 3.7392218 2 TCGAT 704495 3.0233836 3.3033895 5 >>END_MODULE