FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_009.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1814064 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 63 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 112770 | 3.2709808 | 4.2486606 | 1 |
| TTTTT | 108820 | 3.1739955 | 3.802629 | 85-89 |
| GATCG | 582860 | 3.0985947 | 4.5019994 | 1 |
| CGATC | 570535 | 3.0636604 | 3.4899871 | 1 |
| ATCGA | 323580 | 3.0396502 | 4.040546 | 2 |
| TCGAT | 322175 | 3.0298173 | 3.3883471 | 5 |