##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_009.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1814064 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53010698630258 34.0 31.0 34.0 31.0 34.0 2 32.783538508012946 34.0 31.0 34.0 31.0 34.0 3 32.82868189876432 34.0 31.0 34.0 31.0 34.0 4 36.2966538115524 37.0 37.0 37.0 35.0 37.0 5 36.204951423985044 37.0 37.0 37.0 35.0 37.0 6 36.165660086964955 37.0 37.0 37.0 35.0 37.0 7 36.15277961527267 37.0 37.0 37.0 35.0 37.0 8 36.1248522654107 37.0 37.0 37.0 35.0 37.0 9 37.89543037070357 39.0 38.0 39.0 35.0 39.0 10-14 38.143008736185706 39.4 38.2 39.4 35.2 39.4 15-19 39.21547806472098 40.8 39.0 41.0 36.0 41.0 20-24 38.95194116635356 40.0 38.4 41.0 35.0 41.0 25-29 38.41430092874342 40.0 37.8 41.0 34.0 41.0 30-34 37.13304051014738 39.4 35.6 41.0 31.4 41.0 35-39 36.448420452641145 37.8 35.0 40.0 31.4 41.0 40-44 35.19928514098731 35.8 34.4 39.4 29.6 41.0 45-49 34.62446242249447 35.0 34.4 38.0 30.0 40.6 50-54 33.31250275624234 35.0 33.6 35.4 26.2 39.0 55-59 33.28404995634112 35.0 33.0 35.0 28.2 37.0 60-64 32.83221628343874 35.0 33.0 35.0 27.0 35.4 65-69 32.611243594492805 35.0 33.0 35.0 27.8 35.0 70-74 32.068495268083154 35.0 33.0 35.0 25.4 35.0 75-79 31.761625499431112 34.4 32.4 35.0 26.0 35.0 80-84 31.90100724119987 35.0 33.0 35.0 25.8 35.0 85-89 31.534048412845415 35.0 32.6 35.0 24.6 35.0 90-94 31.189458916554212 35.0 32.0 35.0 24.0 35.0 95-99 30.692869711322203 34.8 31.8 35.0 22.0 35.0 100-101 29.132258839820423 33.5 29.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 14.0 3 11.0 4 17.0 5 65.0 6 200.0 7 564.0 8 1291.0 9 1953.0 10 2505.0 11 2901.0 12 3089.0 13 3124.0 14 3351.0 15 3447.0 16 3711.0 17 4144.0 18 4342.0 19 4651.0 20 5084.0 21 5817.0 22 6795.0 23 8787.0 24 11077.0 25 14103.0 26 17911.0 27 22252.0 28 27390.0 29 34009.0 30 42269.0 31 52733.0 32 69034.0 33 98301.0 34 164139.0 35 365126.0 36 578233.0 37 214659.0 38 34118.0 39 2843.0 40 4.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.54236231221636 18.915402186552193 16.94823299919558 28.59400250203587 2 32.29886045916792 22.07915486994946 19.948248793868352 25.673735877014263 3 29.734452588221806 19.822619268118437 20.444262164951184 29.998665978708576 4 31.859735929934114 18.748952627911695 19.07060610871502 30.320705333439175 5 32.09043341359511 18.787981019412765 19.011953271769904 30.109632295222223 6 31.24862187883118 18.123340742112738 17.59408708843789 33.03395029061819 7 33.29904567865301 17.94688610765662 18.009948932341967 30.744119281348397 8 30.624222739660784 18.564560015523156 18.804849222519163 32.0063680222969 9 31.42976212526129 17.474025172210023 18.44918371126928 32.647028991259404 10-14 31.680425828416197 18.355736071053723 18.39807195335997 31.56576614717011 15-19 31.796397481015003 18.05727912576403 18.210151350779245 31.936172042441726 20-24 31.69124722501277 18.13632210226065 18.276956735336118 31.895473937390467 25-29 31.863927874911617 18.223694894814642 18.200839657111896 31.71153757316184 30-34 32.43879559940735 17.99562261573529 17.914481504327085 31.65110028053028 35-39 31.857912789037762 18.102084559925075 18.16731286616486 31.872689784872303 40-44 32.136834540211346 18.126005165057116 18.02853461406403 31.708625680667513 45-49 32.17462007955618 18.033189567733 17.927779835772057 31.86441051693876 50-54 32.128789281965794 18.15256793586114 18.092933876643823 31.625708905529244 55-59 31.989033627870555 18.106354890712232 18.06254144031371 31.842070041103497 60-64 32.11742748998602 17.955566337599898 17.93296080144896 31.994045370965118 65-69 31.94565136491817 18.04056024632755 18.073793515984 31.939994872770278 70-74 32.13764233235432 18.12885322678803 17.99933188685735 31.7341725540003 75-79 32.10694881768229 17.929731255347107 17.90896021309061 32.05435971387999 80-84 31.99951842158706 18.02707423253402 18.01295101946225 31.96045632641667 85-89 32.078598393484405 18.071596888499343 18.03760268416385 31.812202033852405 90-94 32.13474664629628 17.895553122949142 17.914507017902885 32.05519321285169 95-99 32.00567087701023 17.975222602539613 18.034030554115553 31.9850759663346 100-101 32.29464340839133 18.046055706965134 17.918441686732113 31.74085919791143 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.13636481425223 2 57.97259633618218 3 59.733118566930386 4 62.18044126337329 5 62.200065708817334 6 64.28257216944937 7 64.0431649600014 8 62.630590761957684 9 64.0767911165207 10-14 63.24619197558631 15-19 63.732569523456725 20-24 63.58672116240324 25-29 63.575465448073466 30-34 64.08989587993763 35-39 63.73060257391007 40-44 63.845460220878856 45-49 64.03903059649494 50-54 63.75449818749503 55-59 63.83110366897405 60-64 64.11147286095115 65-69 63.88564623768844 70-74 63.87181488635461 75-79 64.16130853156228 80-84 63.95997474800373 85-89 63.89080042733681 90-94 64.18993985914797 95-99 63.99074684334484 100-101 64.03550260630276 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 3.0 2 3.5 3 2.0 4 2.0 5 4.5 6 4.0 7 3.0 8 3.0 9 3.5 10 8.0 11 13.5 12 15.0 13 19.0 14 24.5 15 30.5 16 31.5 17 38.5 18 61.5 19 85.0 20 105.5 21 131.5 22 169.0 23 218.0 24 274.5 25 378.0 26 516.0 27 662.5 28 840.5 29 1035.0 30 1219.5 31 1485.0 32 1805.5 33 2137.0 34 2520.0 35 2830.5 36 3193.5 37 3688.5 38 4156.0 39 4562.0 40 4936.5 41 5353.5 42 5958.5 43 6671.5 44 7305.0 45 8061.0 46 9110.0 47 10373.0 48 11914.5 49 13873.0 50 16131.5 51 18800.5 52 22022.5 53 25523.0 54 29389.5 55 33569.0 56 38161.5 57 43424.5 58 48820.0 59 54427.0 60 60577.0 61 67243.0 62 73704.5 63 79795.5 64 85669.0 65 90861.0 66 94702.0 67 96428.5 68 96119.0 69 94022.5 70 89583.0 71 82885.5 72 74973.5 73 65395.0 74 54993.5 75 45108.0 76 35610.0 77 26823.0 78 19265.5 79 13296.0 80 8722.5 81 5335.5 82 3059.0 83 1667.0 84 901.0 85 486.5 86 271.5 87 154.0 88 94.0 89 70.5 90 54.0 91 33.5 92 16.0 93 11.5 94 9.5 95 6.5 96 2.5 97 2.5 98 1.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.018797572742747775 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 8.819975480468165E-5 25-29 0.0020837192072606036 30-34 0.05106765803191067 35-39 0.02393520846012048 40-44 0.010076821986434878 45-49 0.0 50-54 0.0 55-59 5.071485901269195E-4 60-64 0.019238571516771184 65-69 0.012072341438890799 70-74 0.0 75-79 0.0 80-84 0.0016096455251854399 85-89 0.012425140458109527 90-94 0.010407571066952434 95-99 0.0013009463833690543 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1814064.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.11446623246142165 #Duplication Level Relative count 1 100.0 2 0.08206975929540108 3 0.0015012760846719712 4 0.0 5 0.0 6 5.004253615573238E-4 7 0.0 8 0.0 9 0.0 10++ 0.0010008507231146475 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 112770 3.2709808 4.2486606 1 TTTTT 108820 3.1739955 3.802629 85-89 GATCG 582860 3.0985947 4.5019994 1 CGATC 570535 3.0636604 3.4899871 1 ATCGA 323580 3.0396502 4.040546 2 TCGAT 322175 3.0298173 3.3883471 5 >>END_MODULE