Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_008.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TTTTT | 243145 | 3.2616615 | 3.8951192 | 95-97 |
AAAAA | 244200 | 3.2550282 | 3.8017251 | 65-69 |
GATCG | 1267670 | 3.0551112 | 4.459058 | 1 |
CGATC | 1243540 | 3.0400746 | 3.4927852 | 1 |
ATCGA | 700625 | 3.0016134 | 3.667528 | 2 |