##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7508485 34.0 31.0 34.0 31.0 34.0 2 32.9925025 34.0 31.0 34.0 31.0 34.0 3 33.03424125 34.0 31.0 34.0 31.0 34.0 4 36.43462275 37.0 37.0 37.0 35.0 37.0 5 36.3595925 37.0 37.0 37.0 35.0 37.0 6 36.33553225 37.0 37.0 37.0 35.0 37.0 7 36.3344915 37.0 37.0 37.0 35.0 37.0 8 36.3078765 37.0 37.0 37.0 35.0 37.0 9 38.11304625 39.0 39.0 39.0 37.0 39.0 10-14 38.3557536 39.4 38.6 39.4 36.2 39.4 15-19 39.50478705 41.0 39.8 41.0 37.0 41.0 20-24 38.90207194999999 40.4 38.8 41.0 35.0 41.0 25-29 38.087612 40.0 37.6 41.0 33.2 41.0 30-34 36.85102855 39.4 35.6 41.0 30.4 41.0 35-39 35.8786353 37.6 35.0 40.0 29.4 41.0 40-44 34.5661828 35.6 33.6 39.2 27.2 41.0 45-49 34.57632339999999 35.0 34.4 38.0 30.0 40.6 50-54 33.567548699999996 35.0 33.6 35.6 27.6 39.4 55-59 33.35444755 35.0 33.6 35.0 28.6 37.0 60-64 32.914930549999994 35.0 33.0 35.0 27.4 35.6 65-69 32.56394205 35.0 33.0 35.0 27.6 35.0 70-74 32.09243575 35.0 33.0 35.0 25.6 35.0 75-79 31.60384085 34.4 32.4 35.0 25.4 35.0 80-84 31.271409 35.0 32.4 35.0 23.0 35.0 85-89 31.1143327 35.0 32.4 35.0 22.4 35.0 90-94 30.885560899999994 35.0 32.0 35.0 22.4 35.0 95-99 30.3455418 34.8 31.4 35.0 15.6 35.0 100-101 28.833294125000002 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43.0 3 10.0 4 46.0 5 161.0 6 438.0 7 1423.0 8 3453.0 9 5172.0 10 6572.0 11 7207.0 12 7281.0 13 7289.0 14 7530.0 15 7959.0 16 8797.0 17 9836.0 18 10919.0 19 11773.0 20 13111.0 21 14307.0 22 16771.0 23 20314.0 24 25236.0 25 30365.0 26 37731.0 27 46954.0 28 57682.0 29 71341.0 30 91597.0 31 119504.0 32 166403.0 33 254215.0 34 424027.0 35 809759.0 36 1167828.0 37 453353.0 38 76904.0 39 6677.0 40 12.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.659992069885014 18.774922236372426 16.85711942823171 28.707966265510848 2 32.456825 21.932125 19.845225 25.765825 3 29.750349999999997 19.763824999999997 20.28925 30.196575 4 31.982925 18.60575 18.929399999999998 30.481924999999997 5 32.1257 18.82915 18.9249 30.12025 6 31.297025 18.030450000000002 17.573825000000003 33.0987 7 33.289249999999996 17.982699999999998 17.9781 30.74995 8 30.653625 18.531824999999998 18.805625 32.008925 9 31.42725 17.460825 18.447925 32.664 10-14 31.696914999999997 18.33959 18.367015000000002 31.59648 15-19 31.782890000000002 18.056720000000002 18.223565 31.936825000000002 20-24 31.942414071538007 18.115129156383826 18.159574718620192 31.78288205345798 25-29 32.078915843920356 18.100538803955022 18.095273667587993 31.725271684536633 30-34 32.89668761217323 17.901884215064815 17.77839047695379 31.423037695808166 35-39 32.32958246843325 18.016654292256593 18.01312350948205 31.640639729828102 40-44 32.28293074384372 18.03612520437879 18.04722877986557 31.63371527191191 45-49 32.242435 17.94039 17.915815 31.90136 50-54 32.199872029852834 18.10488082061294 18.000015700018054 31.695231449516164 55-59 32.06403817610499 18.04700462926273 18.022469561791297 31.86648763284099 60-64 32.151482314072666 17.908091135824765 17.90300956206137 32.037416988041194 65-69 32.04285458380897 18.025993242541087 18.019437021117035 31.911715152532917 70-74 32.18987 18.063670000000002 17.92925 31.817210000000003 75-79 32.24608 17.905275 17.84741 32.001235 80-84 32.08625520003396 17.957533112239233 17.99596882522171 31.9602428625051 85-89 32.226936099307245 18.04948609082307 17.913794244191212 31.80978356567847 90-94 32.19365554045869 17.831846982263155 17.849140388199455 32.12535708907869 95-99 32.10580387699145 17.887283513443688 17.96443473629057 32.04247787327429 100-101 32.4939 17.89985 17.83515 31.7711 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.36795833539585 2 58.22265 3 59.94692499999999 4 62.464850000000006 5 62.24595000000001 6 64.395725 7 64.0392 8 62.662549999999996 9 64.09125 10-14 63.293395 15-19 63.719715 20-24 63.72529612499598 25-29 63.80418752845699 30-34 64.31972530798139 35-39 63.970222198261354 40-44 63.91664601575564 45-49 64.143795 50-54 63.895103479369 55-59 63.93052580894597 60-64 64.18889930211387 65-69 63.95456973634188 70-74 64.00708 75-79 64.247315 80-84 64.04649806253906 85-89 64.03671966498572 90-94 64.31901262953738 95-99 64.14828175026574 100-101 64.265 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 3.0 2 3.0 3 4.5 4 3.0 5 2.5 6 5.0 7 5.5 8 6.0 9 8.0 10 9.0 11 17.0 12 27.5 13 31.0 14 45.5 15 66.5 16 79.0 17 92.0 18 125.0 19 167.5 20 216.0 21 269.5 22 354.5 23 485.0 24 615.5 25 773.0 26 1017.5 27 1356.0 28 1710.5 29 2054.0 30 2509.5 31 3119.0 32 3813.0 33 4568.0 34 5376.5 35 6177.5 36 7090.5 37 8041.5 38 8901.0 39 9916.0 40 10932.0 41 11910.0 42 13132.0 43 14422.5 44 15786.5 45 17548.5 46 19896.0 47 22661.5 48 26009.0 49 30048.5 50 34973.0 51 41046.0 52 47797.0 53 55409.5 54 63831.5 55 73109.0 56 83516.0 57 94468.0 58 106266.5 59 119378.0 60 133597.0 61 148055.5 62 162231.0 63 175900.0 64 188507.0 65 199658.5 66 207611.5 67 212015.0 68 212138.0 69 206717.0 70 196758.5 71 182531.5 72 164778.0 73 144751.0 74 122945.5 75 100851.5 76 79714.5 77 60434.0 78 44201.5 79 30976.0 80 20685.5 81 13190.0 82 7969.0 83 4709.0 84 2802.5 85 1691.5 86 1057.5 87 701.5 88 507.0 89 352.0 90 235.5 91 178.0 92 131.0 93 81.0 94 56.5 95 39.0 96 19.5 97 7.5 98 3.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00145 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0012649999999999998 25-29 0.00259 30-34 0.059710000000000006 35-39 0.02217 40-44 0.34741500000000003 45-49 0.0 50-54 1.15E-4 55-59 2.75E-4 60-64 0.030969999999999998 65-69 0.01863 70-74 0.0 75-79 0.0 80-84 0.001855 85-89 0.019785 90-94 0.019694999999999997 95-99 0.0015849999999999998 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.12397520495899952 #Duplication Level Relative count 1 100.0 2 0.09760150556578842 3 0.002502602706815088 4 0.001001041082726035 5 5.005205413630175E-4 6 0.001001041082726035 7 5.005205413630175E-4 8 0.0 9 0.0 10++ 0.001001041082726035 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 243145 3.2616615 3.8951192 95-97 AAAAA 244200 3.2550282 3.8017251 65-69 GATCG 1267670 3.0551112 4.459058 1 CGATC 1243540 3.0400746 3.4927852 1 ATCGA 700625 3.0016134 3.667528 2 >>END_MODULE