##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 64 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62778775 34.0 31.0 34.0 31.0 34.0 2 32.87662125 34.0 31.0 34.0 31.0 34.0 3 32.93096825 34.0 31.0 34.0 31.0 34.0 4 36.37768525 37.0 37.0 37.0 35.0 37.0 5 36.29487325 37.0 37.0 37.0 35.0 37.0 6 36.25520375 37.0 37.0 37.0 35.0 37.0 7 36.2373545 37.0 37.0 37.0 35.0 37.0 8 36.23373725 37.0 37.0 37.0 35.0 37.0 9 37.98866075 39.0 38.0 39.0 35.0 39.0 10-14 38.26343895 39.4 38.2 39.4 35.2 39.4 15-19 39.350539000000005 41.0 39.0 41.0 36.0 41.0 20-24 38.7260893 40.2 38.6 41.0 34.4 41.0 25-29 26.716452750000002 27.4 25.0 30.6 20.8 31.4 30-34 31.409145849999998 35.4 26.8 38.6 15.4 39.8 35-39 34.62982875 36.8 33.0 39.8 25.8 41.0 40-44 33.45262974999999 35.2 33.0 38.8 20.4 40.8 45-49 33.484228200000004 35.0 32.8 36.8 26.2 40.0 50-54 33.010043100000004 35.0 33.4 35.2 24.8 38.4 55-59 33.12316555 35.0 33.0 35.0 28.2 36.8 60-64 31.602058850000002 35.0 32.0 35.0 22.0 35.0 65-69 32.11949445 35.0 32.6 35.0 25.2 35.0 70-74 30.902942250000002 34.6 30.8 35.0 20.8 35.0 75-79 31.388801850000004 34.4 32.0 35.0 25.0 35.0 80-84 31.303725500000002 35.0 32.2 35.0 23.2 35.0 85-89 30.5859527 34.6 31.4 35.0 19.4 35.0 90-94 30.548852 34.0 31.0 35.0 20.0 35.0 95-99 30.040336500000002 34.0 31.0 35.0 12.8 35.0 100-101 28.389584499999998 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 40.0 3 25.0 4 71.0 5 237.0 6 781.0 7 3035.0 8 8909.0 9 9532.0 10 7263.0 11 7571.0 12 6913.0 13 7424.0 14 7867.0 15 8839.0 16 9602.0 17 10671.0 18 11393.0 19 12495.0 20 14083.0 21 16419.0 22 20592.0 23 26298.0 24 33269.0 25 42510.0 26 52928.0 27 65955.0 28 82599.0 29 105990.0 30 139883.0 31 199808.0 32 323556.0 33 543694.0 34 805468.0 35 898259.0 36 425118.0 37 80847.0 38 9901.0 39 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.56865037417657 18.830711980550618 16.916051039623813 28.684586605649 2 32.352875 21.980925000000003 19.881375000000002 25.784825 3 29.6911 19.779275 20.3674 30.162225 4 31.900125000000003 18.726025 18.9673 30.40655 5 32.08685 18.8599 18.941425000000002 30.111824999999996 6 31.266824999999997 18.018825 17.596925 33.117425 7 33.274100000000004 17.9676 17.976275 30.782025 8 30.6486 18.51145 18.7683 32.07165 9 31.4496 17.477149999999998 18.450174999999998 32.623075 10-14 31.695075 18.33359 18.378345 31.59299 15-19 31.765935 18.044345 18.245105 31.944615 20-24 32.05612808963022 18.084996647196856 18.202263505876566 31.656611757296353 25-29 41.12002825389396 16.082531572539413 15.653037331812628 27.144402841753994 30-34 33.776903097303055 18.168802766503685 17.42528488281895 30.629009253374306 35-39 32.31831932744526 18.066012458863575 18.038000849452054 31.577667364239108 40-44 32.34647802979798 18.011895674827098 17.921561061783052 31.720065233591875 45-49 32.263819999999996 18.111269999999998 17.887455 31.737454999999997 50-54 32.0282523269059 18.109397740267855 18.062361863048746 31.799988069777502 55-59 32.023559282711396 18.04874658495902 18.045556546678558 31.882137585651027 60-64 32.25543896742134 17.96963322278498 17.851083882186302 31.923843927607376 65-69 32.02616772130847 18.071753656483384 18.057228260298704 31.84485036190945 70-74 32.19317 18.175935 17.968145 31.66275 75-79 32.199355000000004 17.905135 17.88147 32.01404 80-84 32.072369975388554 18.04870216772813 18.033681591689042 31.84524626519427 85-89 32.2083848749958 18.235586870838326 17.973519520754554 31.58250873341132 90-94 32.18677627352973 17.882958586932265 17.856101123726464 32.07416401581153 95-99 32.10856981452066 17.948459479050616 17.967430075675882 31.975540630752835 100-101 32.468325 17.981975 17.8759125 31.6737875 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.25323697982557 2 58.1377 3 59.853325 4 62.306675 5 62.198675 6 64.38425 7 64.056125 8 62.72025 9 64.072675 10-14 63.288065 15-19 63.71055 20-24 63.71273984692657 25-29 68.26443109564796 30-34 64.40591235067737 35-39 63.89598669168437 40-44 64.06654326338985 45-49 64.001275 50-54 63.8282403966834 55-59 63.90569686836242 60-64 64.1792828950287 65-69 63.87101808321791 70-74 63.85592 75-79 64.21339499999999 80-84 63.91761624058283 85-89 63.79089360840712 90-94 64.26094028934128 95-99 64.0841104452735 100-101 64.14211250000001 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 0.5 2 2.5 3 4.5 4 3.0 5 3.0 6 3.5 7 3.5 8 5.5 9 5.5 10 7.0 11 18.0 12 26.5 13 26.5 14 39.5 15 57.0 16 63.5 17 77.0 18 101.0 19 134.5 20 170.5 21 226.0 22 313.0 23 414.5 24 517.0 25 689.0 26 900.5 27 1134.0 28 1449.0 29 1861.0 30 2362.5 31 2930.0 32 3498.5 33 4124.5 34 4900.0 35 5826.5 36 6745.0 37 7559.0 38 8541.5 39 9670.0 40 10638.5 41 11548.5 42 12774.0 43 14106.0 44 15543.0 45 17183.5 46 19314.0 47 21905.5 48 25141.5 49 29175.5 50 33977.5 51 40050.5 52 46674.0 53 54152.5 54 62830.0 55 72251.0 56 82499.5 57 93775.5 58 106301.5 59 119636.5 60 133779.5 61 148044.5 62 162914.0 63 177896.0 64 190751.5 65 201859.0 66 210271.5 67 214789.5 68 214802.5 69 209451.5 70 199556.0 71 185122.5 72 166911.0 73 145918.5 74 123097.5 75 100325.5 76 78676.0 77 59536.0 78 43277.5 79 29857.0 80 19577.0 81 12293.0 82 7398.0 83 4158.0 84 2293.0 85 1326.5 86 745.0 87 469.0 88 333.5 89 224.0 90 156.0 91 109.5 92 78.5 93 49.0 94 28.5 95 17.5 96 7.0 97 2.0 98 3.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0071 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0015849999999999998 25-29 1.8613149999999998 30-34 0.0905 35-39 0.041445 40-44 1.5936450000000002 45-49 0.0 50-54 0.001865 55-59 0.0012000000000000001 60-64 0.033185 65-69 0.037149999999999996 70-74 0.0 75-79 0.0 80-84 0.003835 85-89 0.01616 90-94 0.046404999999999995 95-99 0.003145 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.057489939260622486 #Duplication Level Relative count 1 100.0 2 0.034013605442176874 3 0.0020008003201280513 4 0.0015006002400960385 5 0.0 6 0.0 7 5.002000800320128E-4 8 0.0 9 0.0 10++ 0.0020008003201280513 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 234680 3.189795 3.9217274 70-74 TTTTT 226975 3.1800747 3.8424969 95-97 >>END_MODULE