##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.73099575 34.0 31.0 34.0 31.0 34.0 2 32.960497 34.0 31.0 34.0 31.0 34.0 3 33.0096255 34.0 31.0 34.0 31.0 34.0 4 36.42450925 37.0 37.0 37.0 35.0 37.0 5 36.35110975 37.0 37.0 37.0 35.0 37.0 6 36.3185265 37.0 37.0 37.0 35.0 37.0 7 36.310911 37.0 37.0 37.0 35.0 37.0 8 36.299807 37.0 37.0 37.0 35.0 37.0 9 38.0900765 39.0 39.0 39.0 37.0 39.0 10-14 38.301137 39.4 38.6 39.4 36.2 39.4 15-19 39.47215225 41.0 39.8 41.0 36.6 41.0 20-24 38.9586492 40.4 38.8 41.0 35.2 41.0 25-29 33.06002175 37.0 26.8 40.6 21.8 41.0 30-34 36.103267 38.4 34.8 40.0 29.4 41.0 35-39 35.8873979 37.6 35.0 40.0 29.8 41.0 40-44 34.622054750000004 35.6 33.6 39.2 27.6 41.0 45-49 34.1056164 35.0 34.0 38.0 28.0 40.6 50-54 32.8305168 35.0 33.0 35.4 24.6 39.0 55-59 32.699341749999995 35.0 33.0 35.0 25.4 36.8 60-64 32.607270299999996 35.0 33.0 35.0 26.6 35.4 65-69 32.43267245 35.0 33.0 35.0 27.0 35.0 70-74 31.555222800000003 35.0 32.8 35.0 23.2 35.0 75-79 31.33285885 34.4 32.2 35.0 24.4 35.0 80-84 31.159288049999997 35.0 32.4 35.0 22.4 35.0 85-89 31.1744 35.0 32.4 35.0 23.6 35.0 90-94 30.857077500000003 35.0 32.0 35.0 21.8 35.0 95-99 30.23259245 34.8 31.0 35.0 15.0 35.0 100-101 28.815036874999997 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 33.0 3 18.0 4 54.0 5 191.0 6 581.0 7 2045.0 8 5361.0 9 7511.0 10 7898.0 11 8480.0 12 8110.0 13 8365.0 14 8760.0 15 9473.0 16 9961.0 17 11082.0 18 12065.0 19 12594.0 20 13933.0 21 15564.0 22 18252.0 23 22206.0 24 27272.0 25 34281.0 26 42681.0 27 52501.0 28 66201.0 29 83656.0 30 108472.0 31 147777.0 32 212513.0 33 324449.0 34 525800.0 35 823917.0 36 957478.0 37 349532.0 38 56087.0 39 4838.0 40 8.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.60101411749353 18.80034930602553 16.9127417447951 28.68589483168585 2 32.35501619514576 21.965497689479204 19.892554032986297 25.78693208238874 3 29.755549999999996 19.7296 20.33515 30.179699999999997 4 31.943235758751975 18.686429417325023 18.94590552009846 30.42442930382454 5 32.088074999999996 18.817875 18.9616 30.13245 6 31.289075 17.999950000000002 17.586125 33.12485 7 33.311075 17.999275 17.9774 30.71225 8 30.62195 18.59355 18.759825 32.024675 9 31.399175 17.504125000000002 18.494175 32.602525 10-14 31.729770000000002 18.371660000000002 18.387125 31.511445 15-19 31.763170000000002 18.082515 18.245075 31.90924 20-24 31.892088597515674 18.039572887657382 18.204140331483924 31.864198183343024 25-29 35.47780252810922 17.403476802767823 17.161769691723446 29.956950977399504 30-34 32.8747128962712 17.97859260931557 17.829932119832232 31.316762374581003 35-39 32.13084312952337 18.06971194289952 18.07176750735752 31.727677420219592 40-44 32.20825648823937 18.172835508463677 17.971116511796424 31.64779149150052 45-49 32.389045 18.1057 17.86939 31.635865000000003 50-54 32.36643371762284 18.30349582566227 17.92947468489779 31.400595771817102 55-59 32.12917 18.098065 18.012715 31.76005 60-64 32.10830061530531 17.87578088421644 17.88377764270363 32.13214085777463 65-69 31.97754379015932 18.071437573517056 18.036384441190357 31.914634195133274 70-74 32.27418 18.194755 17.95415 31.576915 75-79 32.25266 17.95166 17.86157 31.93411 80-84 32.1013594295377 18.098916685446174 17.99654483763432 31.803179047381807 85-89 32.16193124653214 18.01780223006925 17.94078931314139 31.879477210257214 90-94 32.22744188102979 17.826510264962206 17.84588142111563 32.10016643289237 95-99 32.117093799270904 17.90289393958258 17.961474639621944 32.01853762152458 100-101 32.495062499999996 17.933525 17.809525 31.761887500000004 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.28690894917938 2 58.141948277534496 3 59.935249999999996 4 62.36766506257651 5 62.220525 6 64.413925 7 64.023325 8 62.646625 9 64.0017 10-14 63.241215 15-19 63.67241 20-24 63.756286780858694 25-29 65.43475350550874 30-34 64.1914752708522 35-39 63.858520549742956 40-44 63.85604797973989 45-49 64.02491 50-54 63.76702948943994 55-59 63.88922 60-64 64.24044147307994 65-69 63.892177985292584 70-74 63.851095 75-79 64.18677000000001 80-84 63.904538476919505 85-89 64.04140845678936 90-94 64.32760831392217 95-99 64.13563142079548 100-101 64.25695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3.0 1 3.5 2 5.0 3 6.0 4 7.0 5 5.5 6 5.0 7 10.0 8 13.0 9 12.0 10 15.5 11 17.5 12 22.5 13 32.0 14 43.0 15 61.0 16 80.0 17 100.0 18 118.5 19 146.0 20 196.5 21 285.0 22 365.0 23 443.5 24 596.5 25 804.0 26 1023.5 27 1289.0 28 1645.0 29 2077.5 30 2557.0 31 3116.0 32 3737.0 33 4467.0 34 5382.5 35 6271.0 36 7041.0 37 7841.0 38 8828.0 39 9822.0 40 10723.0 41 11797.0 42 12911.0 43 14159.0 44 15715.0 45 17596.5 46 19783.0 47 22474.0 48 25994.0 49 30110.0 50 34934.5 51 40807.0 52 47666.5 53 55202.5 54 63659.0 55 73317.0 56 83744.5 57 94924.5 58 106973.0 59 120202.0 60 134509.5 61 148863.0 62 163086.5 63 176919.0 64 189785.0 65 200762.0 66 209071.5 67 213351.5 68 212694.0 69 207505.5 70 197476.0 71 182498.0 72 164144.0 73 143449.5 74 120982.0 75 98826.5 76 78335.5 77 59499.0 78 43169.5 79 30136.5 80 20159.0 81 12865.0 82 7738.5 83 4606.0 84 2813.5 85 1781.0 86 1158.0 87 770.0 88 557.0 89 396.0 90 296.0 91 228.0 92 147.0 93 90.5 94 60.5 95 39.5 96 25.0 97 12.0 98 5.5 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001725 2 9.0E-4 3 0.0 4 4.25E-4 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001485 25-29 1.736445 30-34 0.07096 35-39 0.027460000000000002 40-44 0.00446 45-49 0.0 50-54 3.05E-4 55-59 0.0 60-64 0.02199 65-69 0.0232 70-74 0.0 75-79 0.0 80-84 0.0018050000000000002 85-89 0.010280000000000001 90-94 0.03178 95-99 0.001195 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.12847045179608976 #Duplication Level Relative count 1 100.0 2 0.10060613947714839 3 0.004004224456801926 4 0.0 5 5.005280571002407E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 5.005280571002407E-4 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position TTTTT 247120 3.375308 4.127536 95-97 AAAAA 251440 3.3388257 4.0576777 1 GATCG 1249765 3.0101676 4.3718433 1 CGATC 1217390 3.0015526 3.5171278 1 >>END_MODULE