Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_005.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 255070 | 3.378599 | 3.960381 | 70-74 |
TTTTT | 252925 | 3.3416722 | 3.8125045 | 80-84 |
GATCG | 1280240 | 3.0936084 | 4.50219 | 1 |
CGATC | 1262055 | 3.067652 | 3.5206206 | 6 |
ATCGA | 713970 | 3.0474222 | 3.878742 | 2 |
TCGAT | 707135 | 3.0167127 | 3.4567204 | 5 |