##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.782745 34.0 31.0 34.0 31.0 34.0 2 33.0067545 34.0 31.0 34.0 31.0 34.0 3 33.0569375 34.0 31.0 34.0 31.0 34.0 4 36.44982325 37.0 37.0 37.0 35.0 37.0 5 36.3890605 37.0 37.0 37.0 35.0 37.0 6 36.3491135 37.0 37.0 37.0 35.0 37.0 7 36.34746375 37.0 37.0 37.0 35.0 37.0 8 36.3309285 37.0 37.0 37.0 35.0 37.0 9 38.130933 39.0 39.0 39.0 37.0 39.0 10-14 38.397224200000004 39.4 38.8 39.4 37.0 39.4 15-19 39.54870595 41.0 40.0 41.0 37.0 41.0 20-24 39.26993945 41.0 39.0 41.0 35.8 41.0 25-29 38.7751137 40.0 38.2 41.0 35.0 41.0 30-34 37.86862309999999 39.8 36.6 41.0 33.2 41.0 35-39 36.79217615 38.2 35.0 40.4 32.4 41.0 40-44 35.7553817 36.0 35.0 39.6 31.0 41.0 45-49 35.1054692 35.0 35.0 38.0 31.4 40.8 50-54 34.27206115 35.0 34.6 35.8 31.0 39.4 55-59 33.628774549999996 35.0 34.0 35.0 30.0 37.6 60-64 33.1825052 35.0 33.4 35.0 29.4 35.6 65-69 32.82879655 35.0 33.0 35.0 29.0 35.0 70-74 32.52094085 35.0 33.0 35.0 27.6 35.0 75-79 31.9171644 34.4 32.6 35.0 26.4 35.0 80-84 32.048902149999996 35.0 33.0 35.0 27.0 35.0 85-89 31.589981549999997 35.0 33.0 35.0 25.0 35.0 90-94 31.2052584 35.0 33.0 35.0 24.0 35.0 95-99 30.6406277 35.0 31.8 35.0 20.8 35.0 100-101 29.301304125 34.0 30.0 35.0 8.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 35.0 3 16.0 4 47.0 5 135.0 6 432.0 7 1255.0 8 2564.0 9 4357.0 10 5370.0 11 6192.0 12 6528.0 13 6610.0 14 6986.0 15 7256.0 16 8075.0 17 8844.0 18 9718.0 19 10621.0 20 11297.0 21 12575.0 22 14510.0 23 17901.0 24 21534.0 25 26767.0 26 33244.0 27 40366.0 28 50414.0 29 61429.0 30 76585.0 31 97043.0 32 127602.0 33 179849.0 34 297879.0 35 729890.0 36 1396448.0 37 603617.0 38 105437.0 39 10546.0 40 26.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.612361741704504 18.78605216312979 16.868037082224934 28.733549012940777 2 32.403949999999995 21.9381 19.825025 25.832925 3 29.7454 19.716825 20.305725 30.23205 4 31.92532794651853 18.664938285802858 18.919720292308035 30.490013475370574 5 32.111875 18.838625 18.958125 30.091375 6 31.26755 18.0488 17.571875000000002 33.111775 7 33.271625 17.94515 17.984275 30.79895 8 30.631874999999997 18.529799999999998 18.7755 32.062825000000004 9 31.41135 17.468025 18.47635 32.644275 10-14 31.657345 18.337210000000002 18.389885 31.61556 15-19 31.782680000000003 18.059545 18.239975 31.917800000000003 20-24 31.71121456929344 18.118025429072535 18.27633274827476 31.894427253359265 25-29 31.8485011469754 18.20430137150548 18.20423637148273 31.74296111003639 30-34 31.992561809870217 18.0286715095677 18.039837199044772 31.93892948151731 35-39 31.853469318314453 18.09035591289325 18.14753585648544 31.908638912306852 40-44 31.97684787934313 18.105875766379363 18.087535512366845 31.82974084191066 45-49 32.056715000000004 17.935225 17.964865 32.043195000000004 50-54 31.91081 18.03199 18.086555 31.970644999999998 55-59 32.044507624479195 18.069119938015966 18.023574912966204 31.86279752453864 60-64 32.086494043076776 17.91313585918041 17.93728223623859 32.06308786150422 65-69 31.946165952689093 18.01769966913202 18.05429663536454 31.981837742814346 70-74 32.06873 18.061255000000003 17.98594 31.884075 75-79 32.106995 17.901030000000002 17.904400000000003 32.087575 80-84 31.99341871181074 17.98297097181102 18.018806452006455 32.00480386437178 85-89 32.09627574970225 18.0697190777904 17.973095260301942 31.860909912205404 90-94 32.183450144720084 17.852596083680066 17.885026185656834 32.07892758594302 95-99 32.075835099608945 17.93716508889379 17.964345483009502 32.02265432848777 100-101 32.41846147076915 17.98113272877432 17.869182602830428 31.731223197626097 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.34591075464527 2 58.236875 3 59.97745 4 62.4153414218891 5 62.20325 6 64.379325 7 64.07057499999999 8 62.694700000000005 9 64.055625 10-14 63.272905 15-19 63.700480000000006 20-24 63.6056418226527 25-29 63.59146225701179 30-34 63.93149129138752 35-39 63.76210823062131 40-44 63.80658872125379 45-49 64.09991000000001 50-54 63.881454999999995 55-59 63.90730514901784 60-64 64.149581904581 65-69 63.92800369550344 70-74 63.952805 75-79 64.19457 80-84 63.99822257618252 85-89 63.95718566190766 90-94 64.2623777306631 95-99 64.09848942809671 100-101 64.14968466839525 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9.0 1 5.5 2 3.5 3 2.5 4 1.0 5 2.5 6 3.0 7 7.5 8 13.0 9 13.5 10 13.5 11 19.0 12 26.0 13 38.0 14 52.0 15 62.5 16 78.5 17 101.5 18 123.5 19 176.0 20 238.0 21 289.0 22 370.0 23 502.5 24 674.5 25 864.0 26 1078.0 27 1389.0 28 1795.0 29 2194.5 30 2704.0 31 3346.5 32 4028.5 33 4824.0 34 5600.5 35 6356.0 36 7257.0 37 8238.0 38 9054.0 39 9944.5 40 11090.0 41 12275.0 42 13369.5 43 14519.0 44 15950.5 45 17837.0 46 20159.5 47 22898.5 48 26377.0 49 30518.0 50 35442.0 51 41448.0 52 48183.0 53 55826.0 54 64241.5 55 73363.5 56 83843.5 57 95186.5 58 107284.0 59 120228.5 60 134141.5 61 147959.0 62 161711.0 63 175770.0 64 188645.0 65 199295.0 66 207227.5 67 211627.0 68 211339.5 69 206319.5 70 196357.0 71 182097.0 72 164053.5 73 143406.5 74 121856.0 75 100103.0 76 79187.5 77 60221.5 78 44001.5 79 30475.0 80 20098.0 81 12777.5 82 7739.0 83 4545.0 84 2644.0 85 1598.5 86 1005.5 87 649.0 88 467.5 89 366.0 90 249.0 91 166.0 92 132.0 93 97.5 94 57.0 95 37.5 96 25.0 97 10.5 98 3.5 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0060 2 0.0 3 0.0 4 0.0027500000000000003 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001465 25-29 3.5E-5 30-34 0.050955 35-39 0.01739 40-44 0.001385 45-49 0.0 50-54 0.0 55-59 5.5E-5 60-64 0.026410000000000003 65-69 0.019035 70-74 0.0 75-79 0.0 80-84 0.00134 85-89 0.019475 90-94 0.031149999999999997 95-99 0.00145 100-101 1.125E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20343795142482268 #Duplication Level Relative count 1 100.0 2 0.16127901269195707 3 0.0065112644875634845 4 0.002504332495216725 5 0.001502599497130035 6 5.008664990433449E-4 7 0.0 8 0.0 9 0.0 10++ 0.0010017329980866899 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 255070 3.378599 3.960381 70-74 TTTTT 252925 3.3416722 3.8125045 80-84 GATCG 1280240 3.0936084 4.50219 1 CGATC 1262055 3.067652 3.5206206 6 ATCGA 713970 3.0474222 3.878742 2 TCGAT 707135 3.0167127 3.4567204 5 >>END_MODULE