Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_004.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 237940 | 3.1670349 | 3.7435906 | 1 |
TTTTT | 234885 | 3.118719 | 3.4508924 | 10-14 |
GATCG | 1279050 | 3.0922909 | 4.5371037 | 1 |
CGATC | 1264445 | 3.0738368 | 3.4304318 | 1 |
ATCGA | 713025 | 3.0489724 | 3.7799063 | 2 |
TCGAT | 709775 | 3.0335872 | 3.3076103 | 8 |