##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.8014265 34.0 31.0 34.0 31.0 34.0 2 33.0253695 34.0 31.0 34.0 31.0 34.0 3 33.06246925 34.0 31.0 34.0 31.0 34.0 4 36.4508255 37.0 37.0 37.0 35.0 37.0 5 36.383877 37.0 37.0 37.0 35.0 37.0 6 36.34909425 37.0 37.0 37.0 35.0 37.0 7 36.341954 37.0 37.0 37.0 35.0 37.0 8 36.32060175 37.0 37.0 37.0 35.0 37.0 9 38.114552 39.0 39.0 39.0 37.0 39.0 10-14 38.3755042 39.4 38.6 39.4 37.0 39.4 15-19 39.501906250000005 41.0 39.8 41.0 37.0 41.0 20-24 39.2480967 40.6 39.0 41.0 35.8 41.0 25-29 38.76238705 40.0 38.2 41.0 35.0 41.0 30-34 37.9335691 39.8 36.6 41.0 33.4 41.0 35-39 36.8209922 38.2 35.0 40.4 32.4 41.0 40-44 35.769390550000004 35.8 35.0 39.6 31.2 41.0 45-49 35.180075699999996 35.0 35.0 38.0 31.6 40.8 50-54 34.378043549999994 35.0 34.6 35.8 31.0 39.4 55-59 33.78067685 35.0 34.0 35.0 30.4 37.4 60-64 33.32558855 35.0 33.6 35.0 29.8 35.6 65-69 32.972281249999995 35.0 33.0 35.0 29.0 35.0 70-74 32.7086362 35.0 33.0 35.0 29.0 35.0 75-79 32.0527702 34.4 32.6 35.0 26.4 35.0 80-84 32.31402634999999 35.0 33.0 35.0 27.0 35.0 85-89 32.01115695 35.0 33.0 35.0 27.0 35.0 90-94 31.54565945 35.0 33.0 35.0 24.4 35.0 95-99 30.99249665 35.0 32.6 35.0 23.0 35.0 100-101 29.64793825 34.0 30.5 35.0 11.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 36.0 3 15.0 4 38.0 5 138.0 6 404.0 7 1018.0 8 2269.0 9 3540.0 10 4513.0 11 5144.0 12 5201.0 13 5434.0 14 5662.0 15 6164.0 16 6966.0 17 7593.0 18 8238.0 19 8885.0 20 9808.0 21 11243.0 22 13194.0 23 16128.0 24 20322.0 25 25152.0 26 31772.0 27 39516.0 28 48907.0 29 60165.0 30 74447.0 31 95166.0 32 125178.0 33 175862.0 34 292720.0 35 740454.0 36 1438994.0 37 598589.0 38 101528.0 39 9571.0 40 26.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.587824239014935 18.80975060941309 16.858053628351772 28.744371523220202 2 32.4252 21.92285 19.8479 25.80405 3 29.759675 19.69955 20.3279 30.212875 4 31.979324999999996 18.645325 18.9115 30.463849999999997 5 32.145649999999996 18.812675000000002 18.9187 30.122975 6 31.336350000000003 18.007524999999998 17.545125 33.111000000000004 7 33.30585 17.913125 17.952725 30.8283 8 30.6906 18.47055 18.755975 32.082875 9 31.471549999999997 17.474500000000003 18.409125 32.644825 10-14 31.707305 18.328274999999998 18.34954 31.61488 15-19 31.808915 18.042055 18.20466 31.94437 20-24 31.729817533753884 18.092887297953833 18.259014798172714 31.91828037011957 25-29 31.8880325384179 18.165659991112996 18.17381499559825 31.772492474870862 30-34 31.97709150593549 17.98984796759288 18.023423658092735 32.00963686837889 35-39 31.867480024569144 18.041180719021508 18.142800454501177 31.948538801908168 40-44 31.981214976518718 18.09305761632202 18.0468025585032 31.87892484865606 45-49 32.072245 17.901500000000002 17.952625 32.073629999999994 50-54 31.933945 17.984145 18.073165 32.008745 55-59 32.034982813993125 18.043302217320885 18.019482207792883 31.902232760893106 60-64 32.08738940288613 17.87383820381823 17.928477715102993 32.11029467819264 65-69 31.959802367826967 17.979432245881576 18.051373421766698 32.00939196452476 70-74 32.073675 18.054524999999998 17.97045 31.90135 75-79 32.135504999999995 17.88775 17.891795 32.08495 80-84 31.986308188660622 17.988533188006844 18.008204066311563 32.01695455702097 85-89 32.076747635911396 17.991632343295006 17.985375057508506 31.946244963285086 90-94 32.173791256516 17.846214100588007 17.867072292642934 32.11292235025306 95-99 32.05697105782734 17.932897971625682 17.987068161129834 32.02306280941714 100-101 32.35964387818917 17.98824402516698 17.866716700956907 31.785395395686944 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.33219576223514 2 58.22925 3 59.972550000000005 4 62.443175 5 62.268625 6 64.44735 7 64.13415 8 62.773475 9 64.116375 10-14 63.322185 15-19 63.753285000000005 20-24 63.648097903873456 25-29 63.66052501328876 30-34 63.98672837431438 35-39 63.81601882647732 40-44 63.86013982517478 45-49 64.14587499999999 50-54 63.94269 55-59 63.93721557488623 60-64 64.19768408107878 65-69 63.969194332351734 70-74 63.975024999999995 75-79 64.220455 80-84 64.0032627456816 85-89 64.02299259919648 90-94 64.28671360676907 95-99 64.08003386724448 100-101 64.14503927387611 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 3.0 2 3.0 3 3.5 4 2.0 5 4.5 6 9.5 7 8.5 8 7.0 9 10.0 10 10.5 11 14.0 12 23.0 13 29.0 14 39.5 15 53.0 16 76.0 17 94.0 18 114.0 19 173.0 20 228.5 21 293.0 22 392.0 23 513.5 24 687.0 25 897.5 26 1131.0 27 1396.5 28 1749.0 29 2177.0 30 2703.0 31 3337.5 32 3978.5 33 4679.0 34 5575.5 35 6429.0 36 7101.0 37 8023.0 38 9071.5 39 9923.0 40 10817.5 41 11893.0 42 13095.0 43 14229.5 44 15608.5 45 17416.0 46 19659.5 47 22749.5 48 26102.0 49 30078.5 50 35207.0 51 41039.5 52 47868.0 53 55446.5 54 63847.0 55 73243.5 56 83302.0 57 94545.0 58 106547.5 59 119329.5 60 133118.5 61 147611.5 62 161952.5 63 176003.5 64 188692.0 65 199151.0 66 207529.0 67 212181.0 68 212252.5 69 207616.0 70 198079.5 71 183683.0 72 165582.0 73 145115.0 74 123034.0 75 100631.5 76 79741.5 77 60609.0 78 44000.5 79 30688.5 80 20163.5 81 12473.5 82 7406.0 83 4167.5 84 2268.0 85 1245.0 86 702.0 87 449.5 88 293.0 89 192.5 90 125.0 91 84.5 92 64.5 93 44.0 94 29.5 95 18.5 96 8.5 97 2.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00625 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.001505 25-29 5.5E-5 30-34 0.03184 35-39 0.00466 40-44 1.25E-4 45-49 0.0 50-54 0.0 55-59 3.9999999999999996E-5 60-64 0.044860000000000004 65-69 0.029435000000000003 70-74 0.0 75-79 0.0 80-84 0.004465 85-89 0.03653 90-94 0.039275 95-99 0.00958 100-101 0.0019125000000000001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.1744633626938332 #Duplication Level Relative count 1 100.0 2 0.14522291717786803 3 0.005508455479160511 4 0.0015023060397710486 5 0.0 6 0.0 7 5.007686799236829E-4 8 0.0 9 0.0 10++ 0.0010015373598473657 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 237940 3.1670349 3.7435906 1 TTTTT 234885 3.118719 3.4508924 10-14 GATCG 1279050 3.0922909 4.5371037 1 CGATC 1264445 3.0738368 3.4304318 1 ATCGA 713025 3.0489724 3.7799063 2 TCGAT 709775 3.0335872 3.3076103 8 >>END_MODULE