FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_003.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4000000 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 63 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 240460 | 3.2014272 | 3.931539 | 1 |
| TTTTT | 238785 | 3.166957 | 3.5046804 | 9 |
| GATCG | 1276135 | 3.084881 | 4.524531 | 1 |
| CGATC | 1264745 | 3.0751624 | 3.3657978 | 6 |
| ATCGA | 711480 | 3.042432 | 3.8564522 | 2 |
| TCGAT | 708020 | 3.0253146 | 3.362485 | 5 |