Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_002.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 242030 | 3.2284496 | 3.8417292 | 70-74 |
TTTTT | 241575 | 3.2128778 | 3.5229297 | 90-94 |
GATCG | 1278885 | 3.0916295 | 4.387749 | 1 |
CGATC | 1261590 | 3.0682743 | 3.4519513 | 1 |
ATCGA | 708180 | 3.0307052 | 3.7287533 | 2 |
TCGAT | 704850 | 3.014673 | 3.4300034 | 5 |