Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L003_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 240635 | 3.1933126 | 3.7071114 | 1 |
TTTTT | 236555 | 3.1316698 | 3.4883819 | 95-97 |
GATCG | 1274930 | 3.0808613 | 4.4030895 | 1 |
CGATC | 1263575 | 3.0720687 | 3.536716 | 6 |
ATCGA | 710165 | 3.0333521 | 3.7218654 | 2 |
TCGAT | 706970 | 3.0182605 | 3.4199114 | 5 |