##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L003_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79535825 34.0 31.0 34.0 31.0 34.0 2 33.01931675 34.0 31.0 34.0 31.0 34.0 3 33.06447425 34.0 31.0 34.0 31.0 34.0 4 36.43458175 37.0 37.0 37.0 35.0 37.0 5 36.37129025 37.0 37.0 37.0 35.0 37.0 6 36.331826 37.0 37.0 37.0 35.0 37.0 7 36.32372 37.0 37.0 37.0 35.0 37.0 8 36.29684275 37.0 37.0 37.0 35.0 37.0 9 38.09215475 39.0 39.0 39.0 37.0 39.0 10-14 38.3620686 39.4 38.6 39.4 36.2 39.4 15-19 39.4856589 41.0 39.8 41.0 36.8 41.0 20-24 39.23751835 40.8 39.0 41.0 35.8 41.0 25-29 38.736393199999995 40.0 38.2 41.0 34.8 41.0 30-34 37.885704399999995 39.8 36.4 41.0 33.2 41.0 35-39 36.7727521 38.2 35.0 40.4 32.0 41.0 40-44 35.72227385 35.8 35.0 39.6 31.0 41.0 45-49 35.10490795 35.0 35.0 38.0 31.2 40.8 50-54 34.261535800000004 35.0 34.4 35.8 30.8 39.4 55-59 33.65008715 35.0 34.0 35.0 30.0 37.6 60-64 33.15916205 35.0 33.2 35.0 29.0 35.6 65-69 32.7827595 35.0 33.0 35.0 29.0 35.0 70-74 32.4804766 35.0 33.0 35.0 27.2 35.0 75-79 31.808022800000003 34.4 32.4 35.0 26.0 35.0 80-84 32.053803900000005 35.0 33.0 35.0 27.0 35.0 85-89 31.697904 35.0 33.0 35.0 25.0 35.0 90-94 31.246365149999995 35.0 33.0 35.0 23.8 35.0 95-99 30.56377145 35.0 31.6 35.0 19.8 35.0 100-101 29.302022125 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43.0 3 25.0 4 36.0 5 150.0 6 394.0 7 1136.0 8 2645.0 9 4196.0 10 5127.0 11 5796.0 12 6067.0 13 6263.0 14 6680.0 15 7228.0 16 8146.0 17 9191.0 18 9908.0 19 10541.0 20 11620.0 21 12906.0 22 15106.0 23 18034.0 24 22482.0 25 27411.0 26 34223.0 27 42052.0 28 51765.0 29 63545.0 30 79523.0 31 100438.0 32 131467.0 33 181859.0 34 296272.0 35 711607.0 36 1384999.0 37 612334.0 38 107638.0 39 11117.0 40 30.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.62806670632459 18.79745479159462 16.877621304855644 28.696857197225146 2 32.400800000000004 21.93545 19.847224999999998 25.816525000000002 3 29.736875 19.71535 20.315849999999998 30.231924999999997 4 31.975524999999998 18.612925 18.936775 30.474774999999998 5 32.148575 18.804625 18.972125000000002 30.074675 6 31.2779 18.0087 17.58465 33.128750000000004 7 33.29705 17.985125 17.974325 30.7435 8 30.623925000000003 18.596799999999998 18.80915 31.970125 9 31.435049999999997 17.507575 18.449199999999998 32.608175 10-14 31.66386 18.34786 18.39383 31.594450000000002 15-19 31.768065 18.053710000000002 18.232699999999998 31.945525000000004 20-24 31.712280684210263 18.12084681270219 18.275844137662066 31.891028365425484 25-29 31.866982521610858 18.20002282011638 18.191957778984673 31.74103687928809 30-34 31.975933158846182 18.00424557718195 18.05351236049019 31.96630890348168 35-39 31.867442247591875 18.079400619764012 18.14581140746416 31.907345725179947 40-44 31.973557657211348 18.110697797768108 18.082427645109284 31.833316899911257 45-49 32.040980000000005 17.92771 17.97317 32.05814 50-54 31.909756269146587 18.037456154311425 18.07831121355126 31.97447636299073 55-59 32.025715 18.06206 18.03561 31.876615 60-64 32.11018870061058 17.897281178919545 17.923509533962044 32.06902058650783 65-69 31.95170742778675 18.005305669139783 18.07845592444548 31.96453097862798 70-74 32.064795000000004 18.05323 17.9803 31.901675 75-79 32.12872 17.90732 17.904105 32.059855 80-84 31.973179399405073 18.002157364397327 18.020797920817934 32.00386531537966 85-89 32.122366987534065 18.006475429217993 17.976102787461326 31.89505479578662 90-94 32.200648252849625 17.875153652172198 17.848642493625565 32.075555601352605 95-99 32.08321009366048 17.920237700263947 17.979607761561674 32.016944444513896 100-101 32.41803908303824 17.970432531939924 17.82410645278509 31.787421932236747 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.32492390354973 2 58.217324999999995 3 59.9688 4 62.450300000000006 5 62.22324999999999 6 64.40665 7 64.04055 8 62.59405 9 64.043225 10-14 63.258309999999994 15-19 63.713589999999996 20-24 63.60330904963575 25-29 63.60801940089894 30-34 63.94224206232786 35-39 63.77478797277183 40-44 63.806874557122605 45-49 64.09912 50-54 63.88423263213732 55-59 63.90233 60-64 64.17920928711841 65-69 63.916238406414735 70-74 63.96647 75-79 64.188575 80-84 63.97704471478474 85-89 64.01742178332069 90-94 64.27620385420224 95-99 64.10015453817438 100-101 64.20546101527499 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6.0 1 5.0 2 3.5 3 3.0 4 3.0 5 2.0 6 2.5 7 7.5 8 8.5 9 8.5 10 15.0 11 17.5 12 22.5 13 31.0 14 40.0 15 52.0 16 81.0 17 114.0 18 134.0 19 162.0 20 213.5 21 289.5 22 388.5 23 488.5 24 615.0 25 853.0 26 1146.5 27 1423.0 28 1790.0 29 2198.5 30 2673.0 31 3272.5 32 3981.5 33 4765.5 34 5560.0 35 6383.5 36 7263.0 37 8215.5 38 9157.0 39 10149.5 40 11106.0 41 12045.5 42 13179.5 43 14457.5 44 15913.0 45 17801.0 46 20048.0 47 22680.5 48 25998.0 49 30258.5 50 35655.0 51 41646.0 52 48081.5 53 55708.0 54 64371.0 55 73697.5 56 83917.0 57 94658.5 58 106713.0 59 120229.5 60 133782.0 61 147570.0 62 162031.5 63 176432.0 64 189358.5 65 199858.0 66 207760.5 67 211848.0 68 211134.5 69 206219.5 70 196533.0 71 182162.0 72 164199.5 73 143811.5 74 122046.0 75 100054.0 76 78785.5 77 59863.0 78 44070.0 79 30690.5 80 20215.0 81 12745.5 82 7742.0 83 4496.0 84 2585.0 85 1525.5 86 922.5 87 589.0 88 399.5 89 276.0 90 202.0 91 134.5 92 88.5 93 66.5 94 44.5 95 24.5 96 13.5 97 9.0 98 2.5 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.019975 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.0015 25-29 5.1E-4 30-34 0.044215 35-39 0.008715 40-44 5.4E-4 45-49 0.0 50-54 1.45E-4 55-59 0.0 60-64 0.031855 65-69 0.02769 70-74 0.0 75-79 0.0 80-84 0.0029850000000000002 85-89 0.02516 90-94 0.042089999999999995 95-99 0.008525 100-101 7.375E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.20044688157638302 #Duplication Level Relative count 1 100.0 2 0.16228237132610743 3 0.006511329713701841 4 0.003005229098631619 5 0.0015026145493158094 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0010017430328772064 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 240635 3.1933126 3.7071114 1 TTTTT 236555 3.1316698 3.4883819 95-97 GATCG 1274930 3.0808613 4.4030895 1 CGATC 1263575 3.0720687 3.536716 6 ATCGA 710165 3.0333521 3.7218654 2 TCGAT 706970 3.0182605 3.4199114 5 >>END_MODULE