Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_009.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 683570 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 45810 | 3.4816828 | 4.3133655 | 7 |
TTTTT | 40940 | 3.2263167 | 3.7302454 | 85-89 |
GATCG | 219395 | 3.1045282 | 4.5094767 | 1 |
CGATC | 214925 | 3.0537195 | 3.5355055 | 1 |
TCGAT | 120360 | 3.0157146 | 3.6338053 | 5 |
ATCGA | 120620 | 3.000415 | 3.5954852 | 3 |