Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_008.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 263660 | 3.476182 | 4.116747 | 60-64 |
TTTTT | 238755 | 3.2355795 | 3.4920197 | 9 |
GATCG | 1277870 | 3.0924423 | 4.32138 | 1 |
CGATC | 1269715 | 3.0861714 | 3.4500246 | 6 |
ATCGA | 710835 | 3.0368772 | 3.7912736 | 2 |
TCGAT | 706445 | 3.034765 | 3.2853212 | 5 |