##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_008.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57956525 34.0 31.0 34.0 31.0 34.0 2 32.72539475 34.0 31.0 34.0 31.0 34.0 3 32.76133925 34.0 31.0 34.0 31.0 34.0 4 36.1406555 37.0 37.0 37.0 35.0 37.0 5 36.149648 37.0 37.0 37.0 35.0 37.0 6 36.1345125 37.0 37.0 37.0 35.0 37.0 7 36.11094925 37.0 37.0 37.0 35.0 37.0 8 36.115991 37.0 37.0 37.0 35.0 37.0 9 37.87114275 39.0 39.0 39.0 35.0 39.0 10-14 38.096018650000005 39.4 38.4 39.4 35.2 39.4 15-19 39.2388044 41.0 39.4 41.0 36.0 41.0 20-24 39.00482885 41.0 39.0 41.0 35.4 41.0 25-29 38.54227225 40.2 38.2 41.0 34.6 41.0 30-34 37.782563749999994 39.8 36.6 41.0 33.2 41.0 35-39 36.6648597 38.2 35.0 40.6 32.0 41.0 40-44 35.6217149 36.0 35.0 39.6 31.0 41.0 45-49 34.6530694 35.0 34.6 38.0 30.2 40.6 50-54 33.409090049999996 34.8 33.2 35.2 28.2 39.2 55-59 33.61587485 35.0 34.2 35.0 30.0 37.4 60-64 33.29034815 35.0 34.0 35.0 29.6 35.6 65-69 33.0128878 35.0 34.0 35.0 29.0 35.0 70-74 32.73393675 35.0 33.2 35.0 29.0 35.0 75-79 32.450449799999994 35.0 33.0 35.0 27.0 35.0 80-84 32.16544555 35.0 33.0 35.0 27.0 35.0 85-89 31.8220483 35.0 33.0 35.0 25.6 35.0 90-94 31.395557149999995 35.0 33.0 35.0 24.0 35.0 95-99 30.809902649999998 35.0 32.4 35.0 21.8 35.0 100-101 29.680978875 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6666.0 3 1282.0 4 1770.0 5 2273.0 6 3068.0 7 3799.0 8 4676.0 9 5390.0 10 5743.0 11 5998.0 12 6067.0 13 6177.0 14 6098.0 15 6120.0 16 6385.0 17 7378.0 18 8399.0 19 9392.0 20 11089.0 21 12986.0 22 15594.0 23 18925.0 24 22759.0 25 27539.0 26 33213.0 27 39623.0 28 49061.0 29 59359.0 30 72837.0 31 92715.0 32 121383.0 33 170452.0 34 281190.0 35 697883.0 36 1409821.0 37 640100.0 38 112507.0 39 14220.0 40 63.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.54727219593431 18.678191979119127 16.709826539844194 29.064709285102364 2 32.81280645225849 22.262668361118337 18.834055476614566 26.090469710008605 3 30.31578715637458 19.601708720920925 19.540343465313246 30.54216065739125 4 32.372163070888206 18.244456230236562 18.22661910098867 31.15676159788656 5 32.208056128947696 18.811892580945013 18.705730263664773 30.274321026442525 6 31.404659334853857 17.943246906125417 17.243751341383554 33.40834241763717 7 33.42528977159731 17.78456527693872 17.804877743715206 30.985267207748755 8 30.66641048195749 18.54612175378448 18.622001463054865 32.16546630120317 9 31.54080637691356 17.448388870025948 18.266370453180112 32.744434299880375 10-14 31.72004339790445 18.353042622999038 18.262781224608666 31.664132754487845 15-19 31.81700673677264 18.05835141407996 18.164309741673176 31.960332107474223 20-24 31.75475713113939 18.108148131033012 18.192392941200122 31.944701796627477 25-29 31.909100825320863 18.215854356707 18.084645038909926 31.790399779062213 30-34 31.979199177123498 18.02307441840851 17.98883291914209 32.008893485325906 35-39 31.85721213906093 18.1000925931113 18.097471655864137 31.945223611963634 40-44 32.01200622444217 18.09886877694552 18.006211240380825 31.88291375823149 45-49 32.07243905917719 17.940773395696922 17.909032498238172 32.07775504688771 50-54 31.920980810597104 18.041154514978576 18.035222999476368 32.00264167494795 55-59 32.01890276218165 18.078793316767 17.989041655203483 31.913262265847862 60-64 32.08091 17.95495 17.872294999999998 32.091845 65-69 31.928219820549554 18.046085115212787 18.003140007850018 32.02255505638764 70-74 32.042105 18.07893 17.96209 31.916875 75-79 32.11065891813965 17.94675301090117 17.87979076096957 32.06279730998961 80-84 31.94886314570549 18.02757276254011 18.005871296606085 32.017692795148314 85-89 32.065445 18.079895 17.937585 31.917075 90-94 32.12383 17.9318 17.8431 32.10127 95-99 31.999475594336417 18.01251953521098 17.96410901237733 32.02389585807527 100-101 32.22070484498898 18.11900501442828 17.89976518500509 31.76052495557765 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.61198148103668 2 58.90327616226709 3 60.85794781376583 4 63.52892466877476 5 62.48237715539021 6 64.81300175249103 7 64.41055697934608 8 62.83187678316066 9 64.28524067679395 10-14 63.38417615239229 15-19 63.777338844246856 20-24 63.69945892776686 25-29 63.699500604383076 30-34 63.988092662449404 35-39 63.80243575102457 40-44 63.894919982673656 45-49 64.1501941060649 50-54 63.92362248554506 55-59 63.932165028029516 60-64 64.17275500000001 65-69 63.95077487693719 70-74 63.95898 75-79 64.17345622812927 80-84 63.96655594085381 85-89 63.98252 90-94 64.2251 95-99 64.02337145241168 100-101 63.98122980056663 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 98.0 1 65.5 2 26.0 3 16.0 4 19.0 5 16.5 6 12.5 7 17.5 8 26.0 9 39.0 10 38.0 11 34.5 12 48.0 13 63.5 14 81.5 15 98.0 16 127.0 17 164.0 18 193.0 19 235.5 20 283.0 21 355.0 22 475.5 23 601.5 24 762.0 25 952.0 26 1173.0 27 1478.0 28 1851.0 29 2289.5 30 2829.5 31 3340.0 32 3934.0 33 4712.0 34 5546.5 35 6350.0 36 7214.0 37 8228.5 38 9187.0 39 9953.0 40 10875.0 41 11914.5 42 12916.0 43 14144.5 44 15657.0 45 17566.5 46 19830.0 47 22401.0 48 25654.0 49 29825.0 50 34750.5 51 40671.0 52 47448.5 53 54964.0 54 63128.5 55 72288.5 56 82717.0 57 93790.5 58 105549.0 59 118373.5 60 132366.5 61 147080.0 62 161449.0 63 175288.0 64 188023.0 65 199174.5 66 208004.5 67 212381.5 68 212016.5 69 207388.5 70 197812.5 71 184029.0 72 166531.5 73 145987.5 74 124427.5 75 102384.0 76 80820.5 77 61328.0 78 44649.5 79 30948.5 80 20306.0 81 12640.0 82 7416.0 83 4093.5 84 2260.0 85 1279.0 86 759.0 87 484.5 88 338.0 89 236.0 90 156.5 91 132.5 92 118.5 93 95.0 94 72.5 95 49.5 96 40.5 97 31.5 98 21.5 99 16.5 100 9.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0808 2 0.066 3 0.0656 4 0.068 5 0.058699999999999995 6 0.05655 7 0.061375000000000006 8 0.0721 9 0.083325 10-14 0.045865 15-19 0.04561 20-24 0.023515 25-29 0.026154999999999998 30-34 0.048185 35-39 0.03576 40-44 0.01353 45-49 0.01858 50-54 0.025549999999999996 55-59 0.024135 60-64 0.0 65-69 2.5E-4 70-74 0.0 75-79 0.0033599999999999997 80-84 0.006755000000000001 85-89 0.0 90-94 0.0 95-99 0.00108 100-101 0.0010625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.28727018385290864 #Duplication Level Relative count 1 100.0 2 0.18688779216875015 3 0.009519753488488615 4 0.0010020793145777487 5 0.0010020793145777487 6 5.010396572888744E-4 7 0.0010020793145777487 8 0.0015031189718666233 9 5.010396572888744E-4 10++ 0.006012475887466493 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 263660 3.476182 4.116747 60-64 TTTTT 238755 3.2355795 3.4920197 9 GATCG 1277870 3.0924423 4.32138 1 CGATC 1269715 3.0861714 3.4500246 6 ATCGA 710835 3.0368772 3.7912736 2 TCGAT 706445 3.034765 3.2853212 5 >>END_MODULE