Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_007.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 270875 | 3.556643 | 4.239551 | 60-64 |
TTTTT | 243750 | 3.290553 | 3.6127665 | 90-94 |
GATCG | 1279930 | 3.0964992 | 4.3844647 | 1 |
CGATC | 1265910 | 3.076879 | 3.530387 | 6 |
TCGAT | 705945 | 3.0283508 | 3.4236443 | 5 |
ATCGA | 709840 | 3.028205 | 3.6644638 | 2 |