##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_007.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62049025 34.0 31.0 34.0 31.0 34.0 2 32.79756675 34.0 31.0 34.0 31.0 34.0 3 32.84434875 34.0 31.0 34.0 31.0 34.0 4 36.18645475 37.0 37.0 37.0 35.0 37.0 5 36.208346 37.0 37.0 37.0 35.0 37.0 6 36.2042785 37.0 37.0 37.0 35.0 37.0 7 36.18936375 37.0 37.0 37.0 35.0 37.0 8 36.14719725 37.0 37.0 37.0 35.0 37.0 9 37.90787425 39.0 39.0 39.0 35.0 39.0 10-14 38.1806004 39.4 38.8 39.4 35.4 39.4 15-19 39.27478515 41.0 39.6 41.0 36.2 41.0 20-24 39.0628847 41.0 39.0 41.0 35.6 41.0 25-29 38.58410335 40.2 38.2 41.0 35.0 41.0 30-34 37.8704427 39.8 36.8 41.0 33.4 41.0 35-39 36.71501425 38.2 35.0 40.6 32.4 41.0 40-44 35.6915479 36.0 35.0 39.6 31.0 41.0 45-49 34.7117009 35.0 34.8 38.0 30.6 40.6 50-54 33.43024405 34.8 33.2 35.2 28.2 39.2 55-59 33.693528 35.0 34.6 35.0 30.2 37.4 60-64 33.3679064 35.0 34.0 35.0 30.0 35.6 65-69 33.08070735 35.0 34.0 35.0 29.2 35.0 70-74 32.80386405 35.0 33.4 35.0 29.0 35.0 75-79 32.5022465 35.0 33.0 35.0 27.8 35.0 80-84 32.18299105 35.0 33.0 35.0 27.0 35.0 85-89 31.8349842 35.0 33.0 35.0 25.8 35.0 90-94 31.367696549999998 35.0 33.0 35.0 24.0 35.0 95-99 30.7649592 35.0 32.0 35.0 21.2 35.0 100-101 29.6054565 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6896.0 3 1240.0 4 1826.0 5 2212.0 6 2969.0 7 3602.0 8 4303.0 9 4967.0 10 5132.0 11 5578.0 12 5611.0 13 5709.0 14 5741.0 15 5873.0 16 6377.0 17 7171.0 18 7812.0 19 9103.0 20 10472.0 21 12337.0 22 14822.0 23 17798.0 24 21722.0 25 26012.0 26 31632.0 27 38409.0 28 46542.0 29 57508.0 30 71150.0 31 91634.0 32 121412.0 33 172990.0 34 293650.0 35 725117.0 36 1404355.0 37 626087.0 38 110490.0 39 13672.0 40 67.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.605270349951795 18.719873381859607 16.69556486126364 28.979291406924958 2 32.79790191765327 22.30764033303053 18.84725590148222 26.04720184783397 3 30.275640473907657 19.645745219589624 19.555546436985455 30.523067869517266 4 32.340001410968625 18.245375450246595 18.239296276894088 31.17532686189069 5 32.2540533347208 18.79735227491035 18.67943435418801 30.269160036180843 6 31.348584801125778 17.938125351117094 17.266982061324367 33.44630778643276 7 33.41603147984392 17.764537733625392 17.831722158248972 30.987708628281712 8 30.707331432324626 18.544747128462266 18.628350127356903 32.119571311856205 9 31.531877006087818 17.431671926122153 18.30861218209539 32.72783888569464 10-14 31.714178715393253 18.34938457270072 18.276536422124266 31.659900289781756 15-19 31.79407715324871 18.084429349802907 18.15649591200875 31.96499758493963 20-24 31.733721774274613 18.142918286268078 18.206818794921528 31.916541144535778 25-29 31.91378246783612 18.213616713364196 18.09547501594678 31.777125802852908 30-34 31.972652212897057 18.02771296319085 17.982931369506375 32.016703454405715 35-39 31.87822973829992 18.113907855803877 18.071764960077783 31.93609744581842 40-44 31.996348950843462 18.11616605432446 18.00642154175012 31.88106345308196 45-49 32.0664252865545 17.97805276208207 17.896417578092866 32.059104373270564 50-54 31.918041869023178 18.02870521159402 18.042714267916274 32.01053865146653 55-59 32.00435576436623 18.078252525109058 18.00093540709913 31.916456303425576 60-64 32.068585 17.92481 17.890715 32.11589 65-69 31.916867988496545 18.039674296387766 18.023209214885615 32.020248500230075 70-74 32.05213 18.07638 17.962895 31.908595000000002 75-79 32.1080843075119 17.930729164765577 17.868417603860976 32.09276892386154 80-84 31.944571186075155 18.011999422574853 18.005879156037246 32.03755023531275 85-89 32.088955000000006 18.05792 17.951575000000002 31.90155 90-94 32.129039999999996 17.89199 17.864525 32.114445 95-99 32.00271524371542 18.00070481134746 17.963254208392755 32.03332573654436 100-101 32.21748707898414 18.10634771701844 17.892141237272426 31.784023966724995 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.58456175687675 2 58.84510376548725 3 60.79870834342492 4 63.515328272859314 5 62.523213370901644 6 64.79489258755854 7 64.40374010812565 8 62.826902744180835 9 64.25971589178245 10-14 63.37407900517501 15-19 63.759074738188346 20-24 63.6502629188104 25-29 63.69090827068903 30-34 63.989355667302775 35-39 63.81432718411833 40-44 63.87741240392542 45-49 64.12552965982506 50-54 63.92858052048971 55-59 63.92081206779181 60-64 64.18447499999999 65-69 63.937116488726616 70-74 63.960725 75-79 64.20085323137344 80-84 63.9821214213879 85-89 63.990505 90-94 64.243485 95-99 64.03604098025978 100-101 64.00151104570914 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 112.0 1 78.0 2 35.0 3 32.5 4 36.5 5 34.0 6 38.0 7 37.0 8 31.5 9 34.0 10 47.0 11 57.0 12 65.5 13 83.0 14 94.0 15 112.5 16 135.0 17 156.0 18 188.5 19 230.0 20 306.5 21 374.5 22 457.0 23 584.5 24 755.0 25 965.0 26 1196.0 27 1481.5 28 1836.0 29 2248.0 30 2728.5 31 3319.0 32 4040.5 33 4833.0 34 5612.0 35 6426.0 36 7291.5 37 8186.5 38 9134.5 39 9927.5 40 10800.5 41 11862.0 42 13034.5 43 14338.5 44 15699.5 45 17377.5 46 19554.5 47 22386.0 48 25787.5 49 29800.5 50 34775.5 51 40621.0 52 46990.0 53 54395.5 54 63158.0 55 72563.5 56 82446.0 57 93711.5 58 105853.0 59 118724.0 60 132804.5 61 146946.5 62 161596.0 63 176053.5 64 188684.0 65 199437.5 66 207519.0 67 211870.5 68 211906.5 69 207491.0 70 198454.0 71 184698.0 72 166544.5 73 145609.0 74 123797.0 75 101894.0 76 80450.5 77 60929.5 78 44295.0 79 30653.0 80 20181.5 81 12613.0 82 7447.5 83 4169.5 84 2363.5 85 1393.5 86 842.0 87 557.5 88 395.0 89 299.0 90 231.0 91 176.0 92 136.0 93 105.5 94 86.5 95 69.0 96 52.5 97 35.5 98 23.0 99 18.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1091 2 0.09924999999999999 3 0.0818 4 0.06865 5 0.0576 6 0.05115 7 0.08845 8 0.1232 9 0.124325 10-14 0.05237 15-19 0.06461 20-24 0.02427 25-29 0.026830000000000003 30-34 0.04822 35-39 0.030600000000000002 40-44 0.01778 45-49 0.012475 50-54 0.028955 55-59 0.02214 60-64 0.0 65-69 4.95E-4 70-74 0.0 75-79 0.002505 80-84 0.004355 85-89 0.0 90-94 0.0 95-99 0.0016099999999999999 100-101 0.003025 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2323710340760881 #Duplication Level Relative count 1 100.0 2 0.16328902156817568 3 0.006511525399957926 4 0.004007092553820262 5 0.0010017731384550654 6 0.0 7 5.008865692275327E-4 8 0.0 9 5.008865692275327E-4 10++ 0.0015026597076825982 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 270875 3.556643 4.239551 60-64 TTTTT 243750 3.290553 3.6127665 90-94 GATCG 1279930 3.0964992 4.3844647 1 CGATC 1265910 3.076879 3.530387 6 TCGAT 705945 3.0283508 3.4236443 5 ATCGA 709840 3.028205 3.6644638 2 >>END_MODULE