##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_006.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57521525 34.0 31.0 34.0 31.0 34.0 2 32.74356575 34.0 31.0 34.0 31.0 34.0 3 32.78972825 34.0 31.0 34.0 31.0 34.0 4 36.15704475 37.0 37.0 37.0 35.0 37.0 5 36.1600775 37.0 37.0 37.0 35.0 37.0 6 36.1519135 37.0 37.0 37.0 35.0 37.0 7 36.138511 37.0 37.0 37.0 35.0 37.0 8 36.125198 37.0 37.0 37.0 35.0 37.0 9 37.87728075 39.0 39.0 39.0 35.0 39.0 10-14 38.096778799999996 39.4 38.6 39.4 35.2 39.4 15-19 39.05594355000001 41.0 39.4 41.0 35.6 41.0 20-24 38.493172050000005 40.4 38.4 41.0 34.0 41.0 25-29 38.47828695 40.0 38.0 41.0 34.8 41.0 30-34 37.773355200000005 39.8 36.4 41.0 33.2 41.0 35-39 36.58876195 38.2 35.0 40.6 31.8 41.0 40-44 35.58268705 35.8 35.0 39.6 31.0 41.0 45-49 34.653925900000004 35.0 34.6 38.0 30.4 40.6 50-54 33.403601550000005 34.8 33.0 35.2 28.2 39.2 55-59 33.60348325 35.0 34.0 35.0 30.0 37.4 60-64 33.269118750000004 35.0 34.0 35.0 29.6 35.6 65-69 32.959092250000005 35.0 34.0 35.0 29.0 35.0 70-74 32.6823282 35.0 33.0 35.0 28.6 35.0 75-79 32.24402385 35.0 33.0 35.0 27.0 35.0 80-84 31.995805099999995 35.0 33.0 35.0 27.0 35.0 85-89 31.65426395 35.0 33.0 35.0 24.4 35.0 90-94 30.922037700000004 35.0 32.2 35.0 21.4 35.0 95-99 30.37850235 35.0 31.0 35.0 16.0 35.0 100-101 28.690813125 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7830.0 3 1426.0 4 2062.0 5 2449.0 6 3227.0 7 4049.0 8 4714.0 9 5233.0 10 5711.0 11 5837.0 12 6240.0 13 6101.0 14 6257.0 15 6348.0 16 6766.0 17 7808.0 18 8530.0 19 9855.0 20 11295.0 21 13666.0 22 15945.0 23 19546.0 24 23230.0 25 27937.0 26 33745.0 27 40892.0 28 49812.0 29 60742.0 30 76056.0 31 97781.0 32 129693.0 33 187332.0 34 324617.0 35 774624.0 36 1331248.0 37 568330.0 38 101172.0 39 11839.0 40 55.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.534977466199294 18.71489734601903 16.72308462694041 29.02704056084126 2 32.815834755578294 22.33358482329034 18.840644648695896 26.009935772435465 3 30.264356836306877 19.633599768159407 19.559923310415385 30.54212008511833 4 32.31938221480138 18.28568010826957 18.24030919290322 31.15462848402583 5 32.2020160059259 18.84920495893414 18.748154413641576 30.200624621498388 6 31.361923339188348 17.954736131699267 17.276098290172833 33.40724223893955 7 33.403130461241574 17.813181247660363 17.803347259395085 30.98034103170298 8 30.647169735286635 18.608704837046805 18.693706265000714 32.05041916266585 9 31.464737658067694 17.463798550390187 18.30278813860949 32.768675652932636 10-14 31.727905015104046 18.365175740268423 18.27373596784474 31.633183276782795 15-19 32.029787089259194 18.073355936002688 18.093124932452177 31.803732042285937 20-24 31.82212989415969 18.23312338936291 18.124802644514734 31.81994407196267 25-29 31.871411560046752 18.219545062330134 18.124489402199234 31.78455397542388 30-34 31.960649149751063 18.027856909619306 17.98568828042794 32.0258056602017 35-39 31.89540745087586 18.1453106013842 18.082856747134567 31.876425200605375 40-44 31.980000789268786 18.12810352565566 18.00630204616182 31.885593638913733 45-49 32.059805283170746 17.95331692923427 17.917220843434205 32.06965694416078 50-54 31.889474778098943 18.051357442467296 18.059595962374924 31.999571817058836 55-59 31.996405368659037 18.09933992889264 17.999155610754464 31.905099091693863 60-64 32.07474424484655 17.953180771908464 17.880315728189437 32.09175925505555 65-69 31.917205855110247 18.039686569451497 18.023546541206446 32.019561034231806 70-74 32.036815000000004 18.079245 17.969045 31.914894999999998 75-79 32.15009628268482 17.94973659331555 17.862671904882077 32.03749521911755 80-84 31.950267972434837 18.037708408767436 18.016131401026865 31.995892217770866 85-89 32.06162160308108 18.070425903521294 17.944485897224293 31.923466596173327 90-94 32.20208194562125 17.982498552746094 17.83121814428899 31.984201357343668 95-99 32.018348596328785 18.002792551635554 17.973510961645218 32.00534789039045 100-101 32.33542748497772 18.231421176018756 17.90389639225162 31.529254946751905 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.56201802704055 2 58.82577052801376 3 60.806476921425215 4 63.47401069882721 5 62.40264062742429 6 64.7691655781279 7 64.38347149294455 8 62.697588897952485 9 64.23341331100032 10-14 63.36108829188684 15-19 63.83351913154514 20-24 63.64207396612236 25-29 63.65596553547063 30-34 63.986454809952754 35-39 63.77183265148123 40-44 63.86559442818252 45-49 64.12946222733153 50-54 63.88904659515779 55-59 63.901504460352896 60-64 64.16650349990209 65-69 63.93676688934205 70-74 63.95170999999999 75-79 64.18759150180237 80-84 63.9461601902057 85-89 63.98508819925441 90-94 64.18628330296492 95-99 64.02369648671923 100-101 63.864682431729626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 107.0 1 73.0 2 32.5 3 29.0 4 32.0 5 30.5 6 21.5 7 27.0 8 43.5 9 45.0 10 47.5 11 58.0 12 64.0 13 79.5 14 104.5 15 115.5 16 137.0 17 179.0 18 230.5 19 280.0 20 327.5 21 385.0 22 497.0 23 624.0 24 777.5 25 986.5 26 1216.5 27 1485.5 28 1828.5 29 2287.5 30 2804.5 31 3368.5 32 4038.5 33 4751.0 34 5579.5 35 6368.5 36 7222.0 37 8174.5 38 9031.5 39 9954.5 40 10966.5 41 11910.5 42 12965.0 43 14341.5 44 15838.5 45 17475.0 46 19663.5 47 22534.5 48 25891.5 49 29916.0 50 34871.0 51 40494.0 52 47063.5 53 54816.0 54 63360.5 55 72817.0 56 83112.5 57 94158.5 58 106362.0 59 119399.0 60 133044.5 61 147381.5 62 161579.5 63 175487.5 64 188478.0 65 199619.5 66 207530.0 67 211851.0 68 212617.0 69 207971.0 70 198370.0 71 184253.5 72 166170.0 73 145324.5 74 122847.0 75 100617.0 76 79280.5 77 60197.0 78 43750.5 79 30188.5 80 20146.0 81 12725.5 82 7588.0 83 4377.5 84 2503.0 85 1437.5 86 886.5 87 618.0 88 418.0 89 330.0 90 254.5 91 204.0 92 168.5 93 111.0 94 85.0 95 71.0 96 48.0 97 40.0 98 36.0 99 25.0 100 15.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15 2 0.12855 3 0.103775 4 0.10120000000000001 5 0.0995 6 0.05714999999999999 7 0.0914 8 0.11932500000000001 9 0.11795 10-14 0.0599 15-19 0.0708 20-24 0.037615 25-29 0.037515 30-34 0.056035 35-39 0.038195 40-44 0.034055 45-49 0.01686 50-54 0.042725 55-59 0.034255 60-64 5.9999999999999995E-5 65-69 1.75E-4 70-74 0.0 75-79 0.005385 80-84 0.009304999999999999 85-89 4.9999999999999996E-6 90-94 2.7E-4 95-99 0.00543 100-101 0.015200000000000002 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2148925537231378 #Duplication Level Relative count 1 100.0 2 0.15525617268493014 3 0.0060099163619972956 4 0.0015024790904993239 5 5.008263634997747E-4 6 0.0010016527269995493 7 0.0 8 0.0 9 0.0 10++ 0.0010016527269995493 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 270740 3.5430994 4.4667625 1 TTTTT 247210 3.340985 3.6237192 95-97 GATCG 1274320 3.0807762 4.337133 1 CGATC 1260720 3.0664206 3.3986819 1 ATCGA 710340 3.0278893 3.8382907 2 TCGAT 703000 3.015953 3.358678 8 >>END_MODULE