Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_005.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 276150 | 3.6259496 | 4.4291 | 1 |
TTTTT | 250465 | 3.3781915 | 3.7736642 | 95-97 |
GATCG | 1279520 | 3.0947874 | 4.352106 | 1 |
CGATC | 1267415 | 3.0800853 | 3.5239618 | 6 |
ATCGA | 709640 | 3.026799 | 3.7905617 | 2 |
TCGAT | 705775 | 3.026522 | 3.4719558 | 5 |