##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_005.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52294425 34.0 31.0 34.0 31.0 34.0 2 32.694336 34.0 31.0 34.0 31.0 34.0 3 32.725823 34.0 31.0 34.0 31.0 34.0 4 36.0986115 37.0 37.0 37.0 35.0 37.0 5 36.093102 37.0 37.0 37.0 35.0 37.0 6 36.1005965 37.0 37.0 37.0 35.0 37.0 7 36.10783725 37.0 37.0 37.0 35.0 37.0 8 36.10901225 37.0 37.0 37.0 35.0 37.0 9 37.8393485 39.0 39.0 39.0 35.0 39.0 10-14 38.1092474 39.4 38.4 39.4 35.2 39.4 15-19 39.167402100000004 41.0 39.0 41.0 36.0 41.0 20-24 38.90019245 41.0 39.0 41.0 35.2 41.0 25-29 38.5124747 40.0 38.2 41.0 34.8 41.0 30-34 37.7135431 39.8 36.4 41.0 33.0 41.0 35-39 36.599789099999995 38.2 35.0 40.6 31.6 41.0 40-44 35.53753345 35.8 35.0 39.6 31.0 41.0 45-49 34.5922949 35.0 34.6 38.0 30.2 40.6 50-54 33.327425 34.8 33.0 35.2 28.0 39.2 55-59 33.5442457 35.0 34.0 35.0 30.0 37.4 60-64 33.198061599999996 35.0 34.0 35.0 29.4 35.6 65-69 32.907173 35.0 33.8 35.0 29.0 35.0 70-74 32.6329732 35.0 33.0 35.0 28.2 35.0 75-79 32.296932899999995 35.0 33.0 35.0 27.0 35.0 80-84 31.96481005 35.0 33.0 35.0 26.2 35.0 85-89 31.657303050000003 35.0 33.0 35.0 24.4 35.0 90-94 31.17427645 35.0 32.8 35.0 23.6 35.0 95-99 30.5387269 35.0 31.6 35.0 19.2 35.0 100-101 29.309138 34.0 30.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 7236.0 3 1377.0 4 1955.0 5 2674.0 6 3415.0 7 4382.0 8 5128.0 9 5929.0 10 6013.0 11 6272.0 12 6651.0 13 6610.0 14 6514.0 15 6547.0 16 7159.0 17 7945.0 18 8912.0 19 9950.0 20 11435.0 21 13559.0 22 16252.0 23 19330.0 24 23358.0 25 28076.0 26 34023.0 27 41062.0 28 49857.0 29 61443.0 30 75655.0 31 96169.0 32 126420.0 33 178492.0 34 295763.0 35 707858.0 36 1371850.0 37 621755.0 38 109296.0 39 13616.0 40 62.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.54536322175083 18.714122159497386 16.721238027773385 29.0192765909784 2 32.79426539385716 22.29073148640528 18.872546134168005 26.042456985569558 3 30.3101032592419 19.60878880485115 19.51981798167196 30.561289954234994 4 32.336502952544876 18.286341749806137 18.24348626720982 31.133669030439165 5 32.23465621136123 18.820025730792583 18.721305857763223 30.22401220008296 6 31.308199244907076 17.983144693469182 17.288717267261784 33.41993879436196 7 33.37449745262625 17.814385334169618 17.85387387874041 30.95724333446372 8 30.699890003636533 18.584508370278073 18.637705792991746 32.07789583309365 9 31.51852635782148 17.48894282996502 18.283472864586383 32.709057947627116 10-14 31.70240391938747 18.371723704546884 18.276547496038575 31.64932488002707 15-19 31.842662771267527 18.094129333938653 18.157799768210218 31.905408126583605 20-24 31.755819172952876 18.142042877987542 18.207291358994002 31.89484659006558 25-29 31.86693724235401 18.230483605207365 18.11022255893626 31.79235659350236 30-34 31.972834871909456 18.030018124654596 17.9955421241067 32.00160487932925 35-39 31.848668343100528 18.12383610148925 18.10454071172238 31.922954843687844 40-44 31.988388962264125 18.11488887338884 18.02211357186911 31.874608592477927 45-49 32.04450165785215 17.966688356694863 17.920708296920786 32.068101688532195 50-54 31.905188965150057 18.059469978152347 18.0340242173241 32.001316839373494 55-59 32.01688512663845 18.078290587179406 18.01124008430063 31.893584201881513 60-64 32.075355 17.91908 17.902065 32.103500000000004 65-69 31.918355 18.04554 18.035105 32.001000000000005 70-74 32.027865 18.096625 17.970135000000003 31.905375000000003 75-79 32.100345000000004 17.944415 17.868015 32.087225000000004 80-84 31.934563193456317 18.04144180414418 18.00327680032768 32.02071820207182 85-89 32.06133 18.071225 17.94719 31.920254999999997 90-94 32.140215 17.925575 17.84628 32.08793 95-99 32.029055 17.987995 17.95601 32.026939999999996 100-101 32.234511493347696 18.139004181535544 17.892089582761454 31.73439474235531 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.56463981272923 2 58.83672237942672 3 60.871393213476885 4 63.47017198298405 5 62.458668411444194 6 64.72813803926904 7 64.33174078708997 8 62.77778583673018 9 64.2275843054486 10-14 63.351728799414545 15-19 63.74807089785113 20-24 63.65066576301845 25-29 63.65929383585637 30-34 63.9744397512387 35-39 63.771623186788375 40-44 63.86299755474205 45-49 64.11260334638435 50-54 63.90650580452355 55-59 63.91046932851996 60-64 64.178855 65-69 63.919355 70-74 63.933240000000005 75-79 64.18757000000001 80-84 63.95528139552814 85-89 63.981584999999995 90-94 64.228145 95-99 64.055995 100-101 63.968906235703 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 135.0 1 89.5 2 35.5 3 32.5 4 36.0 5 33.0 6 36.5 7 42.0 8 48.0 9 49.0 10 56.0 11 68.5 12 73.5 13 74.0 14 90.5 15 113.0 16 132.0 17 162.5 18 187.5 19 228.0 20 283.5 21 369.5 22 454.0 23 537.0 24 702.5 25 922.5 26 1187.0 27 1475.5 28 1792.5 29 2228.0 30 2804.5 31 3388.5 32 4060.5 33 4782.0 34 5568.5 35 6483.0 36 7311.5 37 8143.5 38 9028.5 39 10034.5 40 10915.0 41 11879.5 42 13009.5 43 14278.0 44 15784.0 45 17575.5 46 19857.5 47 22345.5 48 25545.5 49 29779.5 50 34744.0 51 40658.0 52 47326.0 53 54656.5 54 63295.5 55 72905.5 56 82908.5 57 93776.5 58 105962.5 59 118979.0 60 132689.0 61 146834.5 62 161165.0 63 175603.5 64 189002.5 65 199811.0 66 207966.5 67 212750.0 68 212254.0 69 207386.5 70 198315.5 71 184262.0 72 165980.5 73 145385.0 74 123415.5 75 100824.5 76 79825.5 77 60791.0 78 44027.5 79 30364.5 80 20068.0 81 12730.5 82 7619.5 83 4327.0 84 2439.0 85 1461.5 86 895.0 87 619.0 88 444.0 89 316.5 90 262.0 91 196.0 92 148.0 93 117.0 94 88.5 95 71.0 96 54.5 97 41.5 98 29.0 99 12.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.23002500000000003 2 0.19192499999999998 3 0.16390000000000002 4 0.1878 5 0.19740000000000002 6 0.025549999999999996 7 0.0343 8 0.04215 9 0.07615 10-14 0.01703 15-19 0.008535000000000001 20-24 0.005335 25-29 8.7E-4 30-34 0.017405 35-39 0.00202 40-44 3.25E-4 45-49 1.3000000000000002E-4 50-54 0.00299 55-59 7.5E-4 60-64 0.0 65-69 0.0 70-74 0.0 75-79 0.0 80-84 9.999999999999999E-6 85-89 0.0 90-94 0.0 95-99 0.0 100-101 8.5E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.21739890950707486 #Duplication Level Relative count 1 100.0 2 0.16127578158651293 3 0.004507708180989492 4 0.003005138787326328 5 5.008564645543881E-4 6 0.0 7 0.0010017129291087761 8 0.0 9 0.0 10++ 0.0010017129291087761 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 276150 3.6259496 4.4291 1 TTTTT 250465 3.3781915 3.7736642 95-97 GATCG 1279520 3.0947874 4.352106 1 CGATC 1267415 3.0800853 3.5239618 6 ATCGA 709640 3.026799 3.7905617 2 TCGAT 705775 3.026522 3.4719558 5 >>END_MODULE