Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_004.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 247535 | 3.284764 | 4.064168 | 1 |
TTTTT | 236055 | 3.2046678 | 3.4729164 | 9 |
GATCG | 1282280 | 3.105941 | 4.345273 | 1 |
CGATC | 1269805 | 3.0866842 | 3.468784 | 1 |
ATCGA | 711175 | 3.0449557 | 3.6853366 | 2 |
TCGAT | 703835 | 3.0273025 | 3.556415 | 8 |