##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_004.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.616077 34.0 31.0 34.0 31.0 34.0 2 32.80158525 34.0 31.0 34.0 31.0 34.0 3 32.81315475 34.0 31.0 34.0 31.0 34.0 4 36.2059335 37.0 37.0 37.0 35.0 37.0 5 36.208194 37.0 37.0 37.0 35.0 37.0 6 36.18497525 37.0 37.0 37.0 35.0 37.0 7 36.17756675 37.0 37.0 37.0 35.0 37.0 8 36.158676 37.0 37.0 37.0 35.0 37.0 9 37.93228475 39.0 39.0 39.0 37.0 39.0 10-14 38.22359734999999 39.4 39.2 39.4 36.2 39.4 15-19 39.37863685000001 41.0 40.0 41.0 36.8 41.0 20-24 39.162724299999994 41.0 39.0 41.0 35.8 41.0 25-29 38.7183382 40.4 38.4 41.0 35.0 41.0 30-34 37.96353315 39.8 36.8 41.0 33.8 41.0 35-39 36.890184149999996 38.4 35.0 40.6 32.6 41.0 40-44 35.82390925 36.0 35.0 39.6 31.4 41.0 45-49 34.90631325 35.0 35.0 38.0 31.0 40.8 50-54 33.6812771 34.8 33.6 35.4 29.2 39.2 55-59 33.904049199999996 35.0 35.0 35.0 31.0 37.4 60-64 33.5542955 35.0 34.6 35.0 30.8 35.6 65-69 33.2534649 35.0 34.0 35.0 30.0 35.0 70-74 33.00219305 35.0 34.0 35.0 29.0 35.0 75-79 32.77891515 35.0 33.4 35.0 29.0 35.0 80-84 32.50739675 35.0 33.0 35.0 28.0 35.0 85-89 32.1917588 35.0 33.0 35.0 27.0 35.0 90-94 31.823336700000006 35.0 33.0 35.0 25.8 35.0 95-99 31.29054445 35.0 33.0 35.0 24.0 35.0 100-101 30.201570250000003 34.0 31.5 35.0 20.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6057.0 3 948.0 4 1368.0 5 1724.0 6 2325.0 7 2874.0 8 3612.0 9 4147.0 10 4360.0 11 4673.0 12 4754.0 13 4713.0 14 4905.0 15 5207.0 16 5472.0 17 6275.0 18 6956.0 19 8063.0 20 9159.0 21 10948.0 22 13300.0 23 16118.0 24 19794.0 25 24072.0 26 28873.0 27 35585.0 28 43561.0 29 53764.0 30 67287.0 31 85577.0 32 113994.0 33 160854.0 34 269260.0 35 693853.0 36 1475645.0 37 668439.0 38 116548.0 39 14870.0 40 66.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.62286342305444 18.671770459504085 16.69047908141743 29.01488703602405 2 32.84428152727506 22.290236915019698 18.798648259073 26.06683329863224 3 30.284526090984485 19.550808337783643 19.55263517466813 30.612030396563743 4 32.44648132846123 18.227428766476763 18.197649597781027 31.12844030728098 5 32.227547454728786 18.821775832542723 18.72267328618288 30.22800342654562 6 31.371152135192332 17.904830397340067 17.247233679088495 33.47678378837911 7 33.44178722803264 17.754661313837175 17.828182587177547 30.975368870952636 8 30.717326904135277 18.574326833762704 18.60372804331945 32.10461821878256 9 31.565576206484476 17.446820443242885 18.199162106356358 32.78844124391628 10-14 31.72322153571665 18.31234790011686 18.270386377376596 31.694044186789895 15-19 31.812727276639457 18.01876193975625 18.17087725536513 31.99763352823916 20-24 31.750713664636077 18.105652932292067 18.190943003830373 31.95269039924148 25-29 31.87898423451616 18.195591099829585 18.105216160904213 31.820208504750035 30-34 31.983383305532076 17.98644319559824 17.984831673515636 32.04534182535404 35-39 31.86358991077512 18.0766563269593 18.085111812032466 31.974641950233117 40-44 32.00615928289278 18.083453111616222 18.007109773457746 31.90327783203325 45-49 32.07646703375858 17.912588238118868 17.890578730011363 32.12036599811118 50-54 31.911243628165884 18.01557099846517 18.02795029036567 32.04523508300328 55-59 32.017514503626174 18.061007723761836 17.993605768494845 31.92787200411715 60-64 32.08600973331509 17.919622775415302 17.865152690986672 32.12921480028294 65-69 31.92845819284582 18.04113680411368 18.00522680052268 32.025178202517814 70-74 32.034859999999995 18.070315 17.95251 31.942315 75-79 32.109437530961166 17.92358187921171 17.853072800261497 32.11390778956563 80-84 31.9483824934706 18.017224605124234 18.005702795624053 32.02869010578111 85-89 32.070822968429205 18.035830688762974 17.948114737044897 31.945231605762924 90-94 32.13201713201713 17.896767896767894 17.841537841537843 32.129677129677134 95-99 31.974488933865512 17.998016554910993 17.972234668966035 32.05525984225746 100-101 32.184487125860116 18.09634046545073 17.89570825333589 31.823464155353264 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.63775045907849 2 58.9111148259073 3 60.896556487548224 4 63.57492163574221 5 62.455550881274405 6 64.84793592357144 7 64.41715609898527 8 62.821945122917846 9 64.35401745040076 10-14 63.41726572250654 15-19 63.81036080487862 20-24 63.70340406387756 25-29 63.699192739266195 30-34 64.02872513088612 35-39 63.83823186100823 40-44 63.909437114926035 45-49 64.19683303186977 50-54 63.95647871116916 55-59 63.945386507743315 60-64 64.21522453359802 65-69 63.953636395363645 70-74 63.977174999999995 75-79 64.22334532052679 80-84 63.97707259925171 85-89 64.01605457419213 90-94 64.26169426169426 95-99 64.02974877612297 100-101 64.00795128121338 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 9.5 2 7.0 3 8.5 4 9.0 5 8.5 6 10.0 7 11.5 8 13.0 9 19.5 10 31.5 11 43.5 12 54.5 13 75.5 14 99.5 15 125.0 16 139.5 17 170.0 18 226.5 19 271.0 20 334.5 21 439.5 22 532.5 23 605.0 24 744.5 25 997.5 26 1252.0 27 1493.0 28 1843.0 29 2307.0 30 2782.0 31 3304.0 32 3908.0 33 4711.0 34 5555.0 35 6312.5 36 7179.5 37 8029.5 38 8960.5 39 9915.0 40 10846.5 41 11835.0 42 12926.5 43 14151.0 44 15553.0 45 17335.0 46 19572.0 47 22351.0 48 25752.5 49 29708.0 50 34427.5 51 40308.5 52 46957.5 53 54312.5 54 62837.5 55 72440.0 56 82734.0 57 93710.5 58 105503.5 59 118532.0 60 132200.0 61 146161.0 62 160729.0 63 175210.5 64 188652.5 65 199915.0 66 208397.0 67 213216.5 68 213185.5 69 208258.0 70 198482.0 71 184263.0 72 166906.0 73 146976.0 74 124809.0 75 102393.0 76 80748.0 77 61098.5 78 44441.0 79 30587.0 80 20142.5 81 12513.5 82 7190.0 83 3912.5 84 2100.0 85 1120.0 86 612.5 87 392.5 88 263.0 89 182.5 90 146.0 91 118.5 92 98.0 93 72.0 94 47.5 95 37.5 96 31.0 97 19.0 98 14.0 99 9.5 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.139625 2 0.09920000000000001 3 0.10055000000000001 4 0.09795 5 0.10347500000000001 6 0.16297499999999998 7 0.16494999999999999 8 0.174175 9 0.148425 10-14 0.11087 15-19 0.079095 20-24 0.052844999999999996 25-29 0.06079 30-34 0.09445 35-39 0.06487 40-44 0.03057 45-49 0.043199999999999995 50-54 0.03467 55-59 0.04741 60-64 1.55E-4 65-69 9.999999999999999E-6 70-74 0.0 75-79 0.005784999999999999 80-84 0.015705 85-89 0.001085 90-94 9.999999999999999E-5 95-99 0.007315 100-101 0.009825 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.33113244298828065 #Duplication Level Relative count 1 100.0 2 0.20094307949027607 3 0.005512154300232012 4 0.00300662961830837 5 0.001503314809154185 6 0.001503314809154185 7 0.0010022098727694567 8 0.001503314809154185 9 5.011049363847284E-4 10++ 0.005512154300232012 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 247535 3.284764 4.064168 1 TTTTT 236055 3.2046678 3.4729164 9 GATCG 1282280 3.105941 4.345273 1 CGATC 1269805 3.0866842 3.468784 1 ATCGA 711175 3.0449557 3.6853366 2 TCGAT 703835 3.0273025 3.556415 8 >>END_MODULE