Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_003.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 249515 | 3.305965 | 4.187427 | 1 |
TTTTT | 238170 | 3.2295785 | 3.5246031 | 10-14 |
GATCG | 1275450 | 3.0879166 | 4.284147 | 1 |
CGATC | 1267265 | 3.081872 | 3.4252007 | 6 |
ATCGA | 712630 | 3.0496607 | 3.784747 | 2 |
TCGAT | 705370 | 3.032605 | 3.3680158 | 5 |