##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_003.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.7118435 34.0 31.0 34.0 31.0 34.0 2 32.8895485 34.0 33.0 34.0 31.0 34.0 3 32.91175875 34.0 33.0 34.0 31.0 34.0 4 36.27595975 37.0 37.0 37.0 35.0 37.0 5 36.2722955 37.0 37.0 37.0 35.0 37.0 6 36.2485875 37.0 37.0 37.0 35.0 37.0 7 36.240054 37.0 37.0 37.0 35.0 37.0 8 36.21572225 37.0 37.0 37.0 35.0 37.0 9 37.997198 39.0 39.0 39.0 37.0 39.0 10-14 38.30577995 39.4 39.2 39.4 37.0 39.4 15-19 39.47191395 41.0 40.0 41.0 37.0 41.0 20-24 39.24006115 41.0 39.4 41.0 36.2 41.0 25-29 38.800726 40.4 38.6 41.0 35.0 41.0 30-34 38.025428399999996 40.0 37.0 41.0 33.8 41.0 35-39 36.936238599999996 38.4 35.0 40.6 32.8 41.0 40-44 35.8738423 36.0 35.0 39.8 32.0 41.0 45-49 34.94166945 35.0 35.0 38.0 31.0 40.8 50-54 33.7039963 34.8 33.6 35.4 29.4 39.2 55-59 33.896757550000004 35.0 35.0 35.0 31.0 37.6 60-64 33.55836825 35.0 34.8 35.0 31.0 35.6 65-69 33.2510003 35.0 34.0 35.0 30.0 35.0 70-74 32.97268645 35.0 34.0 35.0 29.2 35.0 75-79 32.712696199999996 35.0 33.2 35.0 29.0 35.0 80-84 32.395927050000004 35.0 33.0 35.0 27.0 35.0 85-89 32.06631505 35.0 33.0 35.0 27.0 35.0 90-94 31.675962600000002 35.0 33.0 35.0 25.0 35.0 95-99 31.0789175 35.0 33.0 35.0 23.4 35.0 100-101 29.8930675 34.0 30.5 35.0 17.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 6283.0 3 1072.0 4 1530.0 5 1927.0 6 2507.0 7 3070.0 8 3722.0 9 4312.0 10 4559.0 11 4821.0 12 4928.0 13 5019.0 14 5088.0 15 5316.0 16 5739.0 17 6427.0 18 7155.0 19 8233.0 20 9794.0 21 11182.0 22 13343.0 23 16135.0 24 19312.0 25 23697.0 26 28177.0 27 34573.0 28 42339.0 29 52190.0 30 65134.0 31 83728.0 32 111249.0 33 160524.0 34 272682.0 35 703200.0 36 1467669.0 37 671163.0 38 117388.0 39 14746.0 40 67.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.5908193404359 18.67914393642502 16.69694583180477 29.033090891334318 2 32.854782129272145 22.254620607291614 18.85857967270651 26.03201759072973 3 30.275631899432724 19.59178585802762 19.531214019827516 30.60136822271214 4 32.45825992953235 18.218614870275466 18.178876721652788 31.1442484785394 5 32.20511678475049 18.79628320599131 18.717763618006458 30.280836391251746 6 31.323035136986576 17.936598390372684 17.271820905926134 33.46854556671461 7 33.40854950156246 17.76958811072027 17.777526250325852 31.044336137391415 8 30.694688325839458 18.559447916536204 18.613554099921096 32.132309657703246 9 31.572129152357192 17.441133793925008 18.215529953028266 32.77120710068954 10-14 31.758537265557056 18.29537872321552 18.259906953433013 31.686177057794406 15-19 31.820432995256702 18.028932411665892 18.135831475027906 32.01480311804949 20-24 31.763148829450344 18.08959884835527 18.191067129349623 31.95618519284476 25-29 31.895495525606236 18.18513727640102 18.092738904977978 31.826628293014764 30-34 32.000067468781054 17.987552410304687 17.992597553575994 32.019782567338275 35-39 31.860289013219862 18.074506022046858 18.0875495166227 31.977655448110582 40-44 32.005874960559154 18.07704335602045 17.998821926650127 31.918259756770272 45-49 32.07810964671293 17.905561864813922 17.886990053602158 32.12933843487099 50-54 31.900004221789196 18.027134899770523 18.035828584153965 32.03703229428632 55-59 32.02774682324447 18.059287163732552 17.986875566911518 31.926090446111466 60-64 32.09671949154436 17.918288115760028 17.86790775554045 32.11708463715516 65-69 31.940890896559072 18.031501555127722 18.000761501332626 32.02684604698058 70-74 32.05417 18.05622 17.945035 31.944574999999997 75-79 32.100887340113346 17.903285513118686 17.85684658206317 32.1389805647048 80-84 31.951788977913147 18.016803686927602 17.990959708247082 32.04044762691216 85-89 32.06968375534905 18.03263573476504 17.94500903042564 31.952671479460275 90-94 32.1600953207864 17.874397463779076 17.825302058741986 32.140205156692545 95-99 32.02398693687385 17.986982180522517 17.938154980951943 32.0508759016517 100-101 32.24277111220294 18.08634034312604 17.858869006764756 31.81201953790626 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.62391023177021 2 58.88679972000187 3 60.877000122144864 4 63.60250840807174 5 62.485953176002226 6 64.79158070370119 7 64.45288563895389 8 62.8269979835427 9 64.34333625304673 10-14 63.44471432335146 15-19 63.8352361133062 20-24 63.7193340222951 25-29 63.722123818621 30-34 64.01985003611932 35-39 63.837944461330444 40-44 63.92413471732943 45-49 64.20744808158392 50-54 63.937036516075516 55-59 63.95383726935593 60-64 64.21380412869952 65-69 63.967736943539656 70-74 63.998745 75-79 64.23986790481814 80-84 63.992236604825315 85-89 64.02235523480931 90-94 64.30030047747894 95-99 64.07486283852553 100-101 64.05479065010921 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 10.5 2 8.0 3 7.0 4 8.5 5 11.5 6 12.0 7 11.0 8 18.5 9 28.5 10 38.0 11 55.0 12 68.0 13 80.5 14 103.5 15 134.0 16 161.0 17 183.5 18 229.0 19 292.5 20 333.5 21 374.0 22 485.0 23 634.5 24 745.5 25 932.5 26 1216.0 27 1484.5 28 1809.0 29 2277.5 30 2764.5 31 3299.0 32 3982.5 33 4679.0 34 5422.5 35 6283.5 36 7148.5 37 8085.5 38 9008.0 39 9797.5 40 10721.0 41 11786.5 42 12872.0 43 14072.0 44 15652.5 45 17351.5 46 19423.5 47 22192.5 48 25566.0 49 29644.0 50 34663.5 51 40593.5 52 46937.5 53 54358.5 54 62850.0 55 72143.5 56 82732.5 57 94031.0 58 105952.0 59 118945.5 60 132035.0 61 146489.5 62 161834.0 63 175902.5 64 188862.0 65 199408.5 66 207330.5 67 212041.0 68 212187.0 69 207408.5 70 198552.0 71 184849.5 72 166642.5 73 146213.5 74 124395.5 75 102204.5 76 80753.0 77 61248.0 78 44447.5 79 30871.5 80 20419.0 81 12770.0 82 7514.0 83 4233.5 84 2372.0 85 1349.0 86 809.5 87 572.0 88 413.0 89 287.0 90 210.5 91 156.0 92 124.5 93 100.0 94 82.0 95 62.0 96 41.5 97 29.5 98 23.5 99 18.0 100 13.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.165125 2 0.106475 3 0.1186 4 0.096 5 0.088625 6 0.1508 7 0.165525 8 0.19624999999999998 9 0.189975 10-14 0.11775500000000001 15-19 0.09267 20-24 0.05251 25-29 0.06858500000000001 30-34 0.10194500000000001 35-39 0.065125 40-44 0.04018 45-49 0.036675 50-54 0.04238 55-59 0.05054 60-64 7.15E-4 65-69 1.75E-4 70-74 0.0 75-79 0.008465 80-84 0.015395 85-89 0.001945 90-94 8.250000000000001E-4 95-99 0.014745000000000001 100-101 0.014875000000000001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2448530881471117 #Duplication Level Relative count 1 100.0 2 0.1733206431899013 3 0.005009267144216801 4 0.0020037068576867203 5 5.009267144216801E-4 6 0.0015027801432650402 7 5.009267144216801E-4 8 0.0 9 5.009267144216801E-4 10++ 0.0020037068576867203 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 249515 3.305965 4.187427 1 TTTTT 238170 3.2295785 3.5246031 10-14 GATCG 1275450 3.0879166 4.284147 1 CGATC 1267265 3.081872 3.4252007 6 ATCGA 712630 3.0496607 3.784747 2 TCGAT 705370 3.032605 3.3680158 5 >>END_MODULE