Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_002.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 251300 | 3.321426 | 4.030442 | 1 |
TTTTT | 238260 | 3.2318451 | 3.5816755 | 10-14 |
GATCG | 1278835 | 3.095444 | 4.448722 | 1 |
CGATC | 1265850 | 3.077747 | 3.4790466 | 6 |
TCGAT | 709300 | 3.0488193 | 3.4685376 | 3 |
ATCGA | 711555 | 3.0426831 | 3.6181128 | 2 |