##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R2_002.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4000000 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.65813525 34.0 31.0 34.0 31.0 34.0 2 32.81975275 34.0 31.0 34.0 31.0 34.0 3 32.86303125 34.0 33.0 34.0 31.0 34.0 4 36.23551075 37.0 37.0 37.0 35.0 37.0 5 36.23655775 37.0 37.0 37.0 35.0 37.0 6 36.2167975 37.0 37.0 37.0 35.0 37.0 7 36.20947575 37.0 37.0 37.0 35.0 37.0 8 36.18808025 37.0 37.0 37.0 35.0 37.0 9 37.958626 39.0 39.0 39.0 37.0 39.0 10-14 38.25101945 39.4 39.2 39.4 37.0 39.4 15-19 39.4013997 41.0 40.0 41.0 37.0 41.0 20-24 39.164370299999995 41.0 39.2 41.0 35.8 41.0 25-29 38.727035 40.4 38.4 41.0 35.0 41.0 30-34 37.96265705 40.0 36.8 41.0 33.6 41.0 35-39 36.87262439999999 38.4 35.0 40.6 32.6 41.0 40-44 35.77733685 36.0 35.0 39.6 31.2 41.0 45-49 34.8489917 35.0 35.0 38.0 31.0 40.8 50-54 33.587769200000004 34.8 33.4 35.4 28.6 39.2 55-59 33.8067415 35.0 35.0 35.0 31.0 37.6 60-64 33.46391475 35.0 34.4 35.0 30.4 35.6 65-69 33.1363211 35.0 34.0 35.0 29.6 35.0 70-74 32.8670504 35.0 33.8 35.0 29.0 35.0 75-79 32.57963205 35.0 33.0 35.0 28.2 35.0 80-84 32.25993175000001 35.0 33.0 35.0 27.0 35.0 85-89 31.8974428 35.0 33.0 35.0 26.2 35.0 90-94 31.4919288 35.0 33.0 35.0 24.2 35.0 95-99 30.867485549999998 35.0 32.4 35.0 22.0 35.0 100-101 29.678654 34.0 30.5 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 5759.0 3 1175.0 4 1804.0 5 2068.0 6 2627.0 7 3318.0 8 3841.0 9 4674.0 10 4829.0 11 5067.0 12 5101.0 13 5342.0 14 5421.0 15 5767.0 16 6139.0 17 6748.0 18 7620.0 19 8763.0 20 10131.0 21 12059.0 22 14396.0 23 17479.0 24 21035.0 25 25492.0 26 30734.0 27 37016.0 28 45005.0 29 56049.0 30 69085.0 31 89305.0 32 118792.0 33 168007.0 34 281801.0 35 699214.0 36 1429252.0 37 658346.0 38 116169.0 39 14500.0 40 70.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.585139790267014 18.682893309439788 16.693545236633252 29.038421663659943 2 32.83855004837877 22.284168853680868 18.848224801867275 26.029056296073083 3 30.297260714210626 19.610882456296675 19.583275349231155 30.508581480261544 4 32.396097411077825 18.241542818349043 18.199127725482512 31.163232045090624 5 32.18981311304025 18.8008226459342 18.740467919285813 30.268896321739735 6 31.32947696237961 17.973293037810585 17.295633528304137 33.40159647150567 7 33.39662699674154 17.743084462248326 17.831116553287075 31.029171987723064 8 30.733099485723887 18.523279638857428 18.6395607757985 32.104060099620185 9 31.5243814044392 17.492858675510583 18.23409423168262 32.748665688367595 10-14 31.71591731915254 18.337015477013168 18.286709804877244 31.660357398957057 15-19 31.815772970791006 18.03993770727925 18.172579415163693 31.971709906766055 20-24 31.75052958471915 18.099448087492917 18.199352934303484 31.95066939348445 25-29 31.88340438832081 18.20983152104096 18.117956281673095 31.788807808965135 30-34 31.986406050757495 17.99197280689763 17.994314555246948 32.027306587097925 35-39 31.857555048002485 18.103276351744384 18.084403594097353 31.95476500615578 40-44 31.99479518052042 18.103107781986367 18.00434205102918 31.89775498646404 45-49 32.05414883333011 17.934646963070737 17.90862300612808 32.102581197471075 50-54 31.903841828441514 18.03014982282154 18.048315560469774 32.017692788267176 55-59 32.020202909403814 18.056989254518665 17.99301674259172 31.9297910934858 60-64 32.07859349431219 17.936746524095827 17.871526445831734 32.11313353576024 65-69 31.91969 18.037615000000002 18.02233 32.020365 70-74 32.054115 18.06768 17.95667 31.921535000000002 75-79 32.09695203085355 17.935731693151908 17.855183676628688 32.11213259936584 80-84 31.950607631675034 18.015390875659442 18.003545355641112 32.030456137024416 85-89 32.07974557544026 18.06186973611342 17.92944444477778 31.928940243668535 90-94 32.129324999999994 17.92784 17.82927 32.113565 95-99 32.01067077530887 17.997309954129808 17.958476404743394 32.033542865817935 100-101 32.25594134276484 18.09088961189786 17.83414169714647 31.819027348190826 >>END_MODULE >>Per base GC content pass #Base %GC 1 64.62356145392695 2 58.867606344451865 3 60.80584219447217 4 63.55932945616844 5 62.45870943477999 6 64.73107343388527 7 64.4257989844646 8 62.83715958534407 9 64.2730470928068 10-14 63.37627471810959 15-19 63.78748287755705 20-24 63.7011989782036 25-29 63.67221219728595 30-34 64.01371263785542 35-39 63.81232005415826 40-44 63.89255016698445 45-49 64.15673003080119 50-54 63.92153461670868 55-59 63.94999400288962 60-64 64.19172703007243 65-69 63.940054999999994 70-74 63.975649999999995 75-79 64.20908463021941 80-84 63.98106376869944 85-89 64.0086858191088 90-94 64.24289 95-99 64.0442136411268 100-101 64.07496869095567 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 9.0 2 7.5 3 7.0 4 6.5 5 8.5 6 9.0 7 9.0 8 12.0 9 16.0 10 20.0 11 26.5 12 38.0 13 46.5 14 55.5 15 78.5 16 112.5 17 146.0 18 191.0 19 229.0 20 282.0 21 362.5 22 462.0 23 599.0 24 766.0 25 961.5 26 1217.0 27 1495.5 28 1844.0 29 2314.0 30 2799.0 31 3358.5 32 3995.0 33 4719.0 34 5575.0 35 6366.0 36 7165.5 37 8066.0 38 8937.0 39 9906.0 40 10908.0 41 11941.5 42 12965.0 43 14204.0 44 15678.5 45 17334.0 46 19593.0 47 22422.5 48 25768.5 49 29925.5 50 34728.0 51 40410.0 52 47112.5 53 54767.0 54 63449.5 55 72714.0 56 82877.0 57 93849.0 58 105875.5 59 119028.5 60 132790.0 61 146945.5 62 161314.5 63 175459.5 64 188972.5 65 200387.0 66 207946.5 67 212085.5 68 212506.0 69 207914.5 70 198134.5 71 184054.5 72 166328.0 73 145525.0 74 123462.5 75 101080.5 76 79784.0 77 60735.0 78 44140.0 79 30674.5 80 20279.0 81 12723.5 82 7538.0 83 4348.5 84 2499.5 85 1416.5 86 853.5 87 563.0 88 410.0 89 308.5 90 223.0 91 190.0 92 166.0 93 121.5 94 93.5 95 80.0 96 61.5 97 44.5 98 29.5 99 18.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1683 2 0.11115000000000001 3 0.1163 4 0.094525 5 0.090675 6 0.1047 7 0.12165 8 0.155775 9 0.149825 10-14 0.08084999999999999 15-19 0.06537 20-24 0.03488 25-29 0.049240000000000006 30-34 0.07466 35-39 0.041104999999999996 40-44 0.031115 45-49 0.015205000000000002 50-54 0.031585 55-59 0.03519 60-64 1.1999999999999999E-4 65-69 0.0 70-74 0.0 75-79 0.003745 80-84 0.004390000000000001 85-89 2.2E-4 90-94 0.0 95-99 0.00914 100-101 0.008925 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 4000000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.2214003698335844 #Duplication Level Relative count 1 100.0 2 0.17030058052462596 3 0.004007072482932376 4 5.00884060366547E-4 5 0.001001768120733094 6 0.0 7 0.0 8 5.00884060366547E-4 9 0.0 10++ 5.00884060366547E-4 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 251300 3.321426 4.030442 1 TTTTT 238260 3.2318451 3.5816755 10-14 GATCG 1278835 3.095444 4.448722 1 CGATC 1265850 3.077747 3.4790466 6 TCGAT 709300 3.0488193 3.4685376 3 ATCGA 711555 3.0426831 3.6181128 2 >>END_MODULE