Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4000000 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 247700 | 3.2681289 | 3.9821367 | 1 |
TTTTT | 237645 | 3.220514 | 3.5530453 | 10-14 |
GATCG | 1276740 | 3.090655 | 4.5637226 | 1 |
CGATC | 1265845 | 3.0762491 | 3.4415448 | 6 |
ATCGA | 711960 | 3.042411 | 3.7682538 | 2 |
TCGAT | 704445 | 3.026454 | 3.503078 | 5 |