Basic Statistics
Measure | Value |
---|---|
Filename | 002005_Nocton-Soy_GAGTGG_L002_R1_009.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 683570 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 63 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAAAA | 42035 | 3.235732 | 3.912073 | 65-69 |
TTTTT | 41155 | 3.1740675 | 3.754897 | 80-84 |
GATCG | 219420 | 3.0926502 | 4.2654104 | 1 |
CGATC | 216270 | 3.0844035 | 3.4855638 | 6 |
TCGAT | 120490 | 3.0040228 | 3.3851495 | 3 |