##FastQC 0.10.0 >>Basic Statistics pass #Measure Value Filename 002005_Nocton-Soy_GAGTGG_L002_R1_009.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 683570 Filtered Sequences 0 Sequence length 101 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45497461854675 34.0 31.0 34.0 31.0 34.0 2 32.72446567286452 34.0 31.0 34.0 31.0 34.0 3 32.75733721491581 34.0 31.0 34.0 31.0 34.0 4 36.2523838085346 37.0 37.0 37.0 35.0 37.0 5 36.14121304328744 37.0 37.0 37.0 35.0 37.0 6 36.12176807057068 37.0 37.0 37.0 35.0 37.0 7 36.08280205392279 37.0 36.0 37.0 35.0 37.0 8 36.08383925567242 37.0 36.0 37.0 35.0 37.0 9 37.81468759600334 39.0 38.0 39.0 35.0 39.0 10-14 38.068565911318515 39.4 38.2 39.4 35.2 39.4 15-19 39.11902277747707 40.4 39.0 41.0 35.6 41.0 20-24 38.85207952367717 40.0 38.0 41.0 35.0 41.0 25-29 38.3087525783753 40.0 37.8 41.0 33.6 41.0 30-34 37.49651857161666 39.4 36.0 41.0 32.4 41.0 35-39 36.309632663809126 37.8 35.0 40.2 30.8 41.0 40-44 35.17513583100488 35.6 34.4 39.4 29.6 41.0 45-49 34.14185906344632 35.0 33.6 37.6 27.0 40.6 50-54 32.546037713767426 35.0 32.4 35.2 22.6 38.8 55-59 32.71623886361309 35.0 33.0 35.0 25.6 36.8 60-64 32.865956376084384 35.0 33.0 35.0 27.0 35.4 65-69 32.5216469417909 35.0 33.0 35.0 26.6 35.0 70-74 32.14915751130096 35.0 33.0 35.0 26.0 35.0 75-79 31.626955834808435 34.4 32.0 35.0 25.4 35.0 80-84 31.876346241057973 35.0 33.0 35.0 26.0 35.0 85-89 31.58537618678409 35.0 33.0 35.0 24.6 35.0 90-94 31.11720584578024 35.0 32.2 35.0 23.8 35.0 95-99 30.47883640300189 34.2 31.2 35.0 20.2 35.0 100-101 29.02312564916541 33.5 29.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 3.0 3 4.0 4 6.0 5 32.0 6 96.0 7 265.0 8 568.0 9 845.0 10 1023.0 11 1308.0 12 1228.0 13 1275.0 14 1298.0 15 1369.0 16 1527.0 17 1553.0 18 1697.0 19 1851.0 20 1944.0 21 2308.0 22 2846.0 23 3425.0 24 4477.0 25 5706.0 26 7150.0 27 8645.0 28 11063.0 29 13452.0 30 16364.0 31 20838.0 32 26702.0 33 37547.0 34 63704.0 35 141183.0 36 211999.0 37 75274.0 38 12020.0 39 970.0 40 5.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 35.424466536455476 18.922465819562404 16.973979707536888 28.679087936445235 2 32.330412393756305 21.968927834749916 19.951285164650294 25.749374606843485 3 29.680354608891555 19.823134426613223 20.491537077402462 30.004973887092763 4 31.73500885059321 18.768377781353777 19.150635633512294 30.345977734540718 5 32.04119548839183 18.82967362523224 19.066372134529015 30.062758751846918 6 31.1799815673596 18.00912854572319 17.676463273695454 33.13442661322176 7 33.22819901400003 17.969776321371622 18.05915999824451 30.74286466638384 8 30.730868821042467 18.56342437497257 18.75155433971649 31.95415246426847 9 31.325687201018184 17.540559123425545 18.49993416914142 32.63381950641485 10-14 31.682870810597308 18.35220972248636 18.414266278508418 31.550653188407917 15-19 31.767602440130492 18.068815190836343 18.248079933291397 31.915502435741764 20-24 31.72142038490337 18.1291342527015 18.27704346599712 31.872401896398006 25-29 31.89362637156863 18.19880145192729 18.1820655497305 31.72550662677358 30-34 31.96543024373505 18.00448605770624 18.08549977440886 31.944583924149843 35-39 31.877617810432696 18.097636371990955 18.206131636042436 31.81861418153391 40-44 32.13267604026286 18.119398486118854 18.040265785203296 31.707659688414992 45-49 32.694881285018354 18.01638456924675 17.80827128165367 31.480462864081222 50-54 32.443758503152566 18.18769109235338 17.923577687727665 31.44497271676639 55-59 32.1192855157482 18.140234357856546 18.04535014702225 31.695129979373 60-64 32.036167213967595 17.956561773904586 17.945326085143698 32.06194492698412 65-69 31.926458510169216 18.038825332817197 18.090819105268224 31.943897051745363 70-74 32.07542753485379 18.127360767734103 18.018988545430606 31.77822315198151 75-79 32.09886332050851 17.955556855918196 17.917579765056978 32.02800005851632 80-84 31.982901506651125 18.008716018426814 18.097514662016565 31.9108678129055 85-89 32.10240355779218 18.04731044369999 18.020919583948974 31.829366414558862 90-94 32.089772782468195 17.913299543598647 17.922545782047433 32.07438189188572 95-99 32.01129364951651 17.99054961452375 18.038298930614275 31.959857805345464 100-101 32.328803194991 18.05835539886186 17.95522038708545 31.657621019061693 >>END_MODULE >>Per base GC content warn #Base %GC 1 64.10355447290071 2 58.079787000599794 3 59.685328495984315 4 62.08098658513392 5 62.10395424023874 6 64.31440818058137 7 63.971063680383864 8 62.68502128531094 9 63.959506707433036 10-14 63.23352399900523 15-19 63.68310487587225 20-24 63.593822281301385 25-29 63.61913299834221 30-34 63.910014167884896 35-39 63.69623199196661 40-44 63.84033572867784 45-49 64.17534414909957 50-54 63.88873121991896 55-59 63.8144154951212 60-64 64.09811214095171 65-69 63.87035556191457 70-74 63.853650686835294 75-79 64.12686337902483 80-84 63.893769319556625 85-89 63.931769972351034 90-94 64.16415467435392 95-99 63.971151454861975 100-101 63.9864242140527 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 1.5 2 0.5 3 0.0 4 0.0 5 0.0 6 0.5 7 2.0 8 1.5 9 1.5 10 3.0 11 3.0 12 4.0 13 5.5 14 9.0 15 11.5 16 11.5 17 12.5 18 19.0 19 25.5 20 28.5 21 49.0 22 69.0 23 75.0 24 112.5 25 167.0 26 190.5 27 224.5 28 307.5 29 372.0 30 432.5 31 585.0 32 717.0 33 839.5 34 961.0 35 1081.0 36 1230.0 37 1376.5 38 1536.5 39 1700.0 40 1880.0 41 2019.5 42 2202.0 43 2473.0 44 2744.0 45 3033.5 46 3399.5 47 3850.5 48 4469.5 49 5285.0 50 6069.5 51 7026.0 52 8211.5 53 9497.5 54 10976.5 55 12610.0 56 14494.0 57 16467.0 58 18497.5 59 20614.5 60 22867.5 61 25459.5 62 27852.0 63 30175.0 64 32477.5 65 34401.5 66 35806.5 67 36474.0 68 36490.0 69 35513.5 70 33650.0 71 31283.0 72 28024.5 73 24339.5 74 20688.5 75 16907.5 76 13314.5 77 10014.0 78 7160.0 79 4915.5 80 3245.5 81 2014.0 82 1142.0 83 608.0 84 321.0 85 167.5 86 99.5 87 56.5 88 34.5 89 25.5 90 19.5 91 11.0 92 6.5 93 7.0 94 4.0 95 3.0 96 2.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009508901794988077 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 0.0 20-24 0.00623198794563834 25-29 0.0014043916497213159 30-34 0.06960516113931273 35-39 0.03250581505917463 40-44 0.02355281829220124 45-49 0.0 50-54 0.0 55-59 0.0 60-64 0.0049446289333938 65-69 0.003891335196102813 70-74 0.0 75-79 0.0 80-84 1.462907968459704E-4 85-89 0.0 90-94 0.0071389908860833564 95-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 683570.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 0.07147819914926237 #Duplication Level Relative count 1 100.0 2 0.03901599655858902 3 0.0 4 5.002050840844746E-4 5 5.002050840844746E-4 6 0.0 7 0.0 8 0.0 9 0.0 10++ 0.0010004101681689492 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position AAAAA 42035 3.235732 3.912073 65-69 TTTTT 41155 3.1740675 3.754897 80-84 GATCG 219420 3.0926502 4.2654104 1 CGATC 216270 3.0844035 3.4855638 6 TCGAT 120490 3.0040228 3.3851495 3 >>END_MODULE